DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1208 and Tret1-1

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster


Alignment Length:503 Identity:166/503 - (33%)
Similarity:261/503 - (51%) Gaps:57/503 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 PITYDLLQENQSKTSKTR----------QYVAAMIICLGAVAAGTALSWTSPVFPQISAGNESSF 81
            |....:.::.:.|....|          |.:||:.:.||::..|...::|||....::..|.:||
  Fly   368 PFVRQITEDGKPKLEVYRPTTNPIYIWTQVLAALSVSLGSLVVGFVSAYTSPALVSMTDRNITSF 432

  Fly    82 NSTTGGISNSTSNENDIRLTDSQKTLVGSMLPFGALFGALPSGYIADRIGRRYTAMVMDIPFILA 146
                             .:|....:.||.::|...|.|.:..|.:.:.:|||.|.:...:|||::
  Fly   433 -----------------EVTQDAGSWVGGIMPLAGLAGGIAGGPLIEYLGRRNTILATAVPFIVS 480

  Fly   147 WITLSFANSVGWLYLGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGILFIYVV 211
            .:.::.|.:|..:..||||.|...|...:..|:|:.|..:..:||:||.|......||||..:|.
  Fly   481 SLLIACAVNVAMVLCGRFLAGFCVGIASLSLPVYLGETVQPEVRGTLGLLPTAFGNIGILLCFVA 545

  Fly   212 GALVSWKTLSLLCLIIPILLLVGLFIVPETPVYLLKNGKRSEANRALKWLWGDYCNTSNAIQAI- 275
            |:.::|..|:.|...:|:..|:.:|::||||.:.:..|....|.:|||||.|...:....::.: 
  Fly   546 GSFMNWSMLAFLGAALPVPFLILMFLIPETPRWFVGRGLEERARKALKWLRGKEADVEPELKGLM 610

  Fly   276 --QNDLDQTGVDASVKDLFSNRASRNGMV------------ISVLLMVFQQFSGINAVIFFMNEI 326
              |.|.|:             :||||.|:            ||:.||.||||||||||||:..:|
  Fly   611 RSQADADR-------------QASRNTMLELLKLNNLKPLSISLGLMFFQQFSGINAVIFYTVQI 662

  Fly   327 F-ESSSTLNPNVCTIVVGVVQVIMTLASSLLIEKAGRKILLIFSSTIMTVCLAMLGAYNTINRHT 390
            | ::.||::.|:|||:||:|..:.|....:||::|||||||..|...|.:.|.:||.:.....:.
  Fly   663 FKDAGSTIDGNLCTIIVGIVNFLATFIGIVLIDRAGRKILLYVSDIAMVLTLFVLGGFFYCKTYG 727

  Fly   391 DLSQSIGWLPLLCIVLFIVSFSVGYGPIPWMMMGELFMPDVKGIAVSLSVMMNWVCVSLVTWLFG 455
            .....:|||||.|.|::|:.||:|:|||||:||||:....::|.|.|::...||.|..:||..|.
  Fly   728 PDVSHLGWLPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGSAASVATAFNWFCTFVVTKTFQ 792

  Fly   456 VLN-AGGADVPFWFFSAWMGVATAYVAIALQETKGKSASQIQSWLSGR 502
            .|. |.||...||.|.|...|...:|.|.:.||:||:...|:..:.||
  Fly   793 DLTVAMGAHGAFWLFGAICFVGLFFVIIYVPETQGKTLEDIERKMMGR 840

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 143/402 (36%)
MFS_1 96..443 CDD:284993 127/362 (35%)
Tret1-1NP_610693.1 SP 382..833 CDD:273317 161/480 (34%)
MFS 401..822 CDD:119392 153/450 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444584
Domainoid 1 1.000 212 1.000 Domainoid score I87
eggNOG 1 0.900 - - E1_KOG0254
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 217 1.000 Inparanoid score I143
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 1 1.000 - - FOG0000275
OrthoInspector 1 1.000 - - mtm9751
orthoMCL 1 0.900 - - OOG6_100060
Panther 1 1.100 - - P PTHR48021
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
109.800

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