DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and Slc2a12

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_001100921.1 Gene:Slc2a12 / 308028 RGDID:1310175 Length:621 Species:Rattus norvegicus


Alignment Length:505 Identity:127/505 - (25%)
Similarity:223/505 - (44%) Gaps:113/505 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 IRLTDSQKTLVGSMLPFGALFGALPSGYIADRIGRRYTAMVMDIPFILAWITLSFANSVGWLYLG 162
            :.||..::.:|.|.|..||...:|..|.:.||.|||.|.::......|..:.|..:.|...|..|
  Rat    76 LALTCHEQEMVVSSLLIGAFLASLTGGVLIDRYGRRLTIILSSCLLGLGSLVLILSLSYTLLITG 140

  Fly   163 RFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGILFIYVVG---ALVS--WKTLSL 222
            |..||::.....:...:||:|||....||.|.:|.:|::..||||.|:..   |.:|  ||.:..
  Rat   141 RVAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVTGILFAYISNYAFANISNGWKYMFG 205

  Fly   223 LCLIIPILLLVGLFIVPETPVYLLKNGKRSEANRALKWLWGDYCNTSNAIQAIQNDLDQTGVDAS 287
            |.:.:.:|..:.::.:|.:|.:|:..|:...|.:.|:.| ....:|:..:..|::.| :.....|
  Rat   206 LVIPLGVLQAIAMYFLPPSPRFLVMKGQEEAAGKVLRKL-RVISDTAEELTLIKSSL-KDEYQYS 268

  Fly   288 VKDLFSNRAS-RNGMVISVLLMVFQQFSGINAVIFFMNEIFES---SSTLNPNVCTIVVGVVQVI 348
            ..|||.::.: |..::|.:.|:.|.|.:|...::|:.:.:.:|   .|....::.:..||||:|:
  Rat   269 FWDLFRSKDNMRTRILIGLTLVFFVQTTGQPNILFYASTVLKSVGFQSNEAASLASTGVGVVKVV 333

  Fly   349 MTLASSLLIEKAGRKILLIFSSTIMTVCLAMLGAYN-TIN--------RHTDLSQSI-------- 396
            .|:.::||::..|.|..|...|::|...|..:|..| .||        .|:.|:||:        
  Rat   334 STIPATLLVDHVGSKTFLCIGSSVMAASLLTMGIVNLNINMNFTNICRSHSPLNQSLEELVFYAT 398

  Fly   397 ----------------------------------------------------------------- 396
                                                                             
  Rat   399 GNLSVSNSSLGEHLKRVTPYSKGLFIPLGNGMEPKGEMAFTSLPNAGLSRTDRQGVTDPAVVPAV 463

  Fly   397 -GWLPLLCIVLFIVSFSVGYGPIPWMMMGELFMPDVKGIAVSLSVMMNW---VCVSL----VTWL 453
             .||.|..:::::.:||:|.||:||:::.|:|...::|.|::|:..|||   :.:||    ||.|
  Rat   464 YKWLSLASLLVYVAAFSIGLGPMPWLVLSEIFPGGIRGRAMALTSSMNWGINLLISLTFLTVTDL 528

  Fly   454 FGVLNAGGADVPFW--FFSAWMGVAT-AYVAIALQETKGKSASQIQSWLS 500
            .|:         .|  |....|.:.: |:|.:.:.||||.|..||...||
  Rat   529 IGL---------SWVCFIYTVMSLTSLAFVVLFIPETKGCSLEQISMELS 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 118/485 (24%)
MFS_1 96..443 CDD:284993 104/436 (24%)
Slc2a12NP_001100921.1 MFS_GLUT12_Class3 46..564 CDD:340993 123/498 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338010
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.750

Return to query results.
Submit another query.