DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and Slc2a3

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:XP_006237357.1 Gene:Slc2a3 / 25551 RGDID:3706 Length:495 Species:Rattus norvegicus


Alignment Length:462 Identity:139/462 - (30%)
Similarity:219/462 - (47%) Gaps:57/462 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 FNSTTGGIS----------NSTSNENDIRLTDSQK--------TLVGSMLPFGALFGALPSGYIA 127
            |...||.|:          |.|..|   ||.|...        :|..::...|.:.|:...|...
  Rat    26 FGYNTGVINAPETIIKDFLNYTLEE---RLEDLPSEGLLTTLWSLCVAIFSVGGMIGSFSVGLFV 87

  Fly   128 DRIGRRYTAMVMDIPFILAWITLSF---ANSVGWLYLGRFLIGIATGSFCVVAPMYISEIAETSI 189
            :|.|||.:.:::::..||....:.|   |.||..|.|||.:|||..|......||||.|::.|::
  Rat    88 NRFGRRNSMLLVNLIAILGGCLMGFAKIAESVEMLILGRLIIGIFCGLCTGFVPMYIGEVSPTAL 152

  Fly   190 RGSLGTLFQLLLTIGILFI------YVVGALVSWKTLSLLCLIIPILLLVGLFIVPETPVYLLKN 248
            ||:.|||.||.:.:|||..      :::|:...|..|..|.:|..||....|...||:|.:||.|
  Rat   153 RGAFGTLNQLGIVVGILVAQVFGLDFILGSEELWPGLLGLTIIPAILQSAALPFCPESPRFLLIN 217

  Fly   249 GK-RSEANRALKWLWGDYCNTSNAIQAIQNDLDQT-----GVDASVKDLFSNRASRNGMVISVLL 307
            .| ..:|...|:.|||    |.:.||.||...|::     ....:|.:||.:.:....::|||:|
  Rat   218 RKEEDQATEILQRLWG----TPDVIQEIQEMKDESIRMSQEKQVTVLELFKSPSYFQPLLISVVL 278

  Fly   308 MVFQQFSGINAVIFFMNEIFESSSTLNPNVCTIVVGVVQVIMTLASSLLIEKAGRKIL------- 365
            .:.|||||||||.::...||:.:....|...||..|||..|.|:.|..|:|:|||:.|       
  Rat   279 QLSQQFSGINAVFYYSTGIFQDAGVQEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGG 343

  Fly   366 LIFSSTIMTVCLAMLGAYNTINRHTDLSQSIGWLPLLCIVLFIVSFSVGYGPIPWMMMGELFMPD 430
            :...|..||:.|.:...|          :::.::.::.|::::..|.:|.|||||.::.|||...
  Rat   344 MAVCSVFMTISLLLKDEY----------EAMSFVCIVAILVYVAFFEIGPGPIPWFIVAELFSQG 398

  Fly   431 VKGIAVSLSVMMNWVCVSLVTWLFGVLNAGGADVPFWFFSAWMGVATAYVAIALQETKGKSASQI 495
            .:..|::::...||....||...|....|......|..|:|::.....:....:.||||::...|
  Rat   399 PRPAAMAVAGCSNWTSNFLVGMFFPSAAAYLGAYVFIIFAAFLVFFLIFTFFKVPETKGRTFEDI 463

  Fly   496 QSWLSGR 502
            .....|:
  Rat   464 TRAFEGQ 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 126/415 (30%)
MFS_1 96..443 CDD:284993 117/376 (31%)
Slc2a3XP_006237357.1 Sugar_tr 15..467 CDD:278511 138/457 (30%)
MFS 16..450 CDD:119392 133/440 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.