DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and ght3

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_592790.1 Gene:ght3 / 2541758 PomBaseID:SPAC1F8.01 Length:555 Species:Schizosaccharomyces pombe


Alignment Length:465 Identity:114/465 - (24%)
Similarity:213/465 - (45%) Gaps:67/465 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 ESSFNSTTGGISNSTSNENDIRLTDSQKTLVGSMLPFGALFGALPSGYIADRIGRRYTAMVMDIP 142
            :|.|......||||.|      .:..::.|:...:..|.||||:.|....:|||::|:.......
pombe    37 QSRFADRYNPISNSYS------YSAWRQALLTGTINAGCLFGAMLSSPFTERIGKKYSICFFSGV 95

  Fly   143 FILAWITLSFANSVGWL--YLGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGI 205
            :|:|.:.|..| ...|:  .:|:.|.|:..|:..|::|.|.||:|...|||::...:|:..|...
pombe    96 YIIAELLLVTA-VPSWIQVLVGKILAGVGIGALSVLSPGYQSEVAPPQIRGAVVATYQIFSTGAA 159

  Fly   206 LFIYVVGALV-----------SWKTLSLLCLIIPILLLVGLFIVPETPVYLLKNGKRSEANRALK 259
            |    |.|.:           ||:|...:.::..|||:||:..:||:|.||:..|:..||.|.: 
pombe   160 L----VAACINMGTHKLRKTASWRTSFGINMLWGILLMVGVLFLPESPRYLIYKGRDEEALRIM- 219

  Fly   260 WLWGDYCN------TSNAIQ----AIQND--LDQTGVDASVKDLFSNRASRNGMVISVLLMVFQQ 312
                  ||      .|..||    .|::|  ::..|..|...::| .:..|....:..|:|:|::
pombe   220 ------CNMAELSPESEIIQTNFNTIKSDIEIEMAGGKARWIEIF-GKDIRYRTCLGFLVMLFRE 277

  Fly   313 FSGINAVIFFMNEIFESSSTLNPNVCTIVVGVVQVIMTLASSLLIEKAGRKILLIFSSTIMTVCL 377
            ..|.|...::..::|:.:...:..:..:::|.:....|..:...|:..||:..|||.:...::|.
pombe   278 LIGNNYYFYYATQVFKGTGMTDIFLPAVILGAINFGTTFGALYTIDNLGRRNPLIFGAAFQSICF 342

  Fly   378 ---AMLGAYNTINRHTDLSQSIGWLPLLCIVLFIVSFSVGYGPIPWMMMGELFMPDVKGIAVSLS 439
               |.:|....|.::.......|.:.::...||:.|:...:||:.|:::||.|....:....|::
pombe   343 FIYAAVGDRKLIYKNGTSDHRAGSVMIVFSCLFLFSYCCSWGPMGWVIVGETFPIRYRSKCASVA 407

  Fly   440 VMMNWVCVSLVTWLFGVL-NAGGADVPFWF-----FSAWMGVATAYVAIALQETKGKS------- 491
            ...||:...::::....: ||.|..:.:.:     ||::|      :....:||||.:       
pombe   408 TSGNWLGNFMISFFTPFINNAIGFKLGYIYACINLFSSFM------IFFLAKETKGLTLEEVNDL 466

  Fly   492 -ASQIQSWLS 500
             .|.|:.|.|
pombe   467 YMSNIKPWES 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 99/419 (24%)
MFS_1 96..443 CDD:284993 91/374 (24%)
ght3NP_592790.1 Sugar_tr 9..467 CDD:278511 110/454 (24%)
MFS 10..452 CDD:119392 106/439 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9279
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.800

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