DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and ght4

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_595064.1 Gene:ght4 / 2539710 PomBaseID:SPBC1683.08 Length:557 Species:Schizosaccharomyces pombe


Alignment Length:454 Identity:106/454 - (23%)
Similarity:204/454 - (44%) Gaps:49/454 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 ESSFNSTTGGISNSTSNENDIRLTDSQKTLVGSMLPFGALFGALPSGYIADRIGRRYTAMVMDIP 142
            :|.|......|:||.|      .:..::.|:...:..|.||||:.|....:.||::|:.......
pombe    37 QSRFADRYNPITNSYS------YSAWRQALLTGTVNAGCLFGAMLSSPFTEAIGKKYSIAFFSGC 95

  Fly   143 FILAWITLSFANSVGW--LYLGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGI 205
            :|:..|.|..| ...|  :.:|:...|:..|:..|::|.|.||:|...|||::.:.:||..|.|.
pombe    96 YIIGQILLVTA-VPSWVQIMVGKLFTGLTIGALSVLSPGYQSEVAPPQIRGAVVSTYQLFQTCGT 159

  Fly   206 LFIYVVG-------ALVSWKTLSLLCLIIPILLLVGLFIVPETPVYLLKNGKRSEANRALKWLWG 263
            |....:.       ...||:|...:.::..|.|:||:..:||:|.||:..|:..||.|.:     
pombe   160 LIAACINMGTHKLRKTASWRTSFGINILWGIFLMVGVLFLPESPRYLIYKGRDEEALRIM----- 219

  Fly   264 DYCNT------SNAIQ----AIQND--LDQTGVDASVKDLFSNRASRNGMVISVLLMVFQQFSGI 316
              |.|      |..||    .|::|  ::..|..|...::|.... |...|:..|.|:.::..|.
pombe   220 --CQTAELDPESEIIQTNFNTIKSDIEMEMAGGKARWPEVFGKEV-RYRTVLGFLTMLLRELIGN 281

  Fly   317 NAVIFFMNEIFESSSTLNPNVCTIVVGVVQVIMTLASSLLIEKAGRKILLIFSSTIMTVCL---A 378
            |...::..::|:.:...:..:..:::|.:....|..:...|:..||:..|||.:...::|.   |
pombe   282 NYYFYYATQVFKGTGMTDIFLPAVILGAINFGTTFGALYTIDNLGRRNPLIFGAAFQSICFFIYA 346

  Fly   379 MLGAYNTINRHTDLSQSIGWLPLLCIVLFIVSFSVGYGPIPWMMMGELFMPDVKGIAVSLSVMMN 443
            .:|....|.::.......|.:.::...||:.|:...:||:.|:::||.|....:....:::...|
pombe   347 AVGDRKLIYKNGTSDHRAGAVMIVFSCLFLFSYCCSWGPMGWVIVGETFPIRYRSKCAAVATSGN 411

  Fly   444 WVCVSLVTWLFGVLNAGGADVPFWFFSAWMGVATAY-VAIALQETKGKS--------ASQIQSW 498
            |:...:|:: |....:........:..|.:.:.:|: :.:..:||||.:        .|.|:.|
pombe   412 WLGNFMVSF-FTPFISNSIGFKLGYIYACINMTSAFQIFLMAKETKGLTLEEVNELYESDIKPW 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 93/410 (23%)
MFS_1 96..443 CDD:284993 87/370 (24%)
ght4NP_595064.1 Sugar_tr 9..467 CDD:278511 103/445 (23%)
MFS 10..440 CDD:119392 98/418 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9279
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.800

Return to query results.
Submit another query.