DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and ght8

DIOPT Version :10

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_587746.1 Gene:ght8 / 2539300 PomBaseID:SPCC548.06C Length:547 Species:Schizosaccharomyces pombe


Alignment Length:472 Identity:106/472 - (22%)
Similarity:203/472 - (43%) Gaps:72/472 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 FNSTTGGISNSTSNENDIR---------LTD------SQKTLVGSMLPFGALFGALPSGYIADRI 130
            |.:.||.|...| |..|.:         :||      :::.|:..|:..|::.|.:.|..:.|||
pombe    20 FGADTGSIGGIT-NMRDFQSRFADRYNPVTDTYSYSSARQGLITGMVNVGSMTGCILSSPLMDRI 83

  Fly   131 GRRYTAMVMDIPFILAWITLSFANSVGW--LYLGRFLIGIATGSFCVVAPMYISEIAETSIRGSL 193
            |:|.:.|...|.:::. |.|.......|  :.:.:...|:|.|:..|:||.:.||:|..::||::
pombe    84 GKRVSIMFWTIVYLIG-IILQVTAVPSWVQIMVAKIWTGLAIGALSVLAPGFQSEVAPATLRGTI 147

  Fly   194 GTLFQLLLTIGILFIYVVG-------ALVSWKTLSLLCLIIPILLLVGLFIVPETPVYLLKNGKR 251
            .|.:||.:|.||.....:.       ....|:....:.|:..|::.:|:..:||:|.||:..||.
pombe   148 VTTYQLAVTGGIFIAACINMGTHKLHKTAQWRVSMGINLLWGIIMFIGISFLPESPRYLIAIGKD 212

  Fly   252 SEANRALKWLWGDYCNTSNAIQAIQNDLDQTGVDASVKDLFSNRAS-------------RNGMVI 303
            .||...:       |  .|.:...::::.||.......|..:..|.             |....:
pombe   213 EEALDIM-------C--KNNVLPREHEIIQTEYHVIKTDCEAEMAGGPATWGDILGADIRYRTFL 268

  Fly   304 SVLLMVFQQFSGINAVIFFMNEIFESSSTLNPNVCTIVVGVVQVIMTLASSLLIEKAGRKILLIF 368
            .:.:|..||.:|.|...::..|:||.:...:|.:..:::..|....|.....::|..||::.||.
pombe   269 GLGVMSLQQLTGDNYYFYYGFEVFEGTGMNSPYLSALILDAVNFGCTFGGLFVLEFFGRRMPLII 333

  Fly   369 SSTIMTVCL---AMLGAYNTINRHTDLSQSIGWLPLLCIVLFIVSFSVGYGPIPWMMMGELFMPD 430
            .....::..   |.:|......::...:...|.:.::...|||.||:..:||..::::||.:...
pombe   334 GGVWQSITFFIYAAVGNRALTRKNGTSNHRAGAVMIVFSCLFIFSFAQTWGPAAYVIVGESYPIR 398

  Fly   431 VKGIAVSLSVMMNWVCVSLVTWLFGVLNAGGADVPF----------WFFSAWMGVATAYVAIALQ 485
            .:....:::...||:...|:|:.          .||          :.|:|....|...:.:...
pombe   399 YRSKCAAVATTGNWLWGFLITFF----------TPFISDSIGFKYGYIFAACNLCAACIIFLFAH 453

  Fly   486 ETKGKSASQI-QSWLSG 501
            ||||.:..:| :.:|||
pombe   454 ETKGLTLEEINELYLSG 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS_GLUT6_8_Class3_like 46..494 CDD:340916 102/462 (22%)
ght8NP_587746.1 MFS_HXT 8..467 CDD:340914 103/467 (22%)

Return to query results.
Submit another query.