DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and K08F9.1

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_506734.2 Gene:K08F9.1 / 187167 WormBaseID:WBGene00010684 Length:490 Species:Caenorhabditis elegans


Alignment Length:494 Identity:116/494 - (23%)
Similarity:224/494 - (45%) Gaps:65/494 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 KTSKTRQYVAAMIICL-GAVAAGTALSWTSP---VFPQISAGNESSFNSTTGGISNSTSNENDIR 99
            :|...|..:.|:|..: |:...|..|..|:|   .|  :|..|::......||:|:.|       
 Worm     3 ETPSFRMLIVAVITSMAGSFHYGYNLVLTNPSQDAF--LSFMNQTFAKRFDGGLSDHT------- 58

  Fly   100 LTDSQKTLVGSMLPFGALFGALPSGYIADRIGRRYTAMVMDIPFILAWITLSFANSVGWLY---- 160
             ..:..:.|.::|..|||.|:....:||:.:||:....:.....:||. .:|.|:....|:    
 Worm    59 -LQNIWSFVVAVLFLGALAGSFSIPFIAEGVGRKNGLYISISVGVLAG-GMSIASKFIPLFELYI 121

  Fly   161 LGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGILFIYVVGALVS----WKTLS 221
            :.|.::|.:......::.:::||.:....||::|.:....:.:|.    |||::|:    :.|..
 Worm   122 ISRVVMGWSVSVSLGLSGIFLSEASPKQNRGAIGMMTGTAIQLGT----VVGSVVAMPQIFGTDD 182

  Fly   222 LLCLI----IPILLLVG--LFIVPETPVYLLKNGKRSEANRALKWLWGDYCNTSNA---IQAIQN 277
            |..:|    |.|:|:.|  |...||:|.||::.|....|..::.:.:  .|....|   ::.||.
 Worm   183 LWWVIYATEIGIMLVFGAALPFFPESPGYLIQKGSLESATISISFYY--KCEKEEADKHVKEIQK 245

  Fly   278 DLDQTGVDASVKDLFSNRASRNGMVISVLLMVFQQFSGINAVIFFMNEIFESSSTLN------PN 336
            :...:....::.|:...::.|:...:..::.....|||:..:..|..||..::. ||      .|
 Worm   246 EQMNSTKKFTMLDVIQQKSLRDKAFVGAVVTFVMSFSGVAVISAFAFEILVNTG-LNVLQASLAN 309

  Fly   337 VCTIVVGVVQVIMTLASSLLIEKAGRKILLIFSSTIMTVC-LAMLGAYNTINRHTDLSQSIGWLP 400
            ..|.:|.|:..::.:|   :|:|.||:.||:.|...:.:| |.:.|...|.::..  :|.:|::.
 Worm   310 DATTIVSVISSVLAIA---IIDKNGRRPLLLISLAGILICNLIIFGLMFTFDKFG--NQVLGFIL 369

  Fly   401 LLCIVLFIVSFSVGYGPIPWMMMGELFMPDVKGIAVSLSVMMNWVCVSLVTWLFGVLNA------ 459
            :..|.:|...|::|.||:.:.:..||...|.:..|.|      |..|..:...|.::.|      
 Worm   370 IFFICIFQFFFALGPGPLSYFINAELVGQDARSAAQS------WASVVQMISQFSIITAFLPMKN 428

  Fly   460 --GGADVPFWFFSAWMGVATAYVAIALQETKGKSASQIQ 496
              |.|......|.|.:.|:..::..:|.|||.||..:::
 Worm   429 QLGEAWSYLILFVAPVAVSLVFLYFSLPETKNKSPIEVE 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 94/417 (23%)
MFS_1 96..443 CDD:284993 85/370 (23%)
K08F9.1NP_506734.2 MFS 13..461 CDD:391944 112/476 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157995
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

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