DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and srx-128

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_506426.3 Gene:srx-128 / 186283 WormBaseID:WBGene00006019 Length:339 Species:Caenorhabditis elegans


Alignment Length:394 Identity:78/394 - (19%)
Similarity:138/394 - (35%) Gaps:148/394 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 QKTLVGS------MLPFGALFGALPSGYIADRIGRRYTAMVMDIPFILAWITLSFA--------- 153
            |.:|:||      :|.|.|..|. |:|:       :...:|..:|.|:  :.|||.         
 Worm    48 QTSLLGSICNIYLLLKFSARDGR-PNGF-------QKICLVKTVPNII--VCLSFLFWVVPLTAF 102

  Fly   154 ----NSVG-WLYLGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGILFIYVV-- 211
                |.|. ||   ..|:|...|::..:    ::.|.:.|:  |....:.|....||..:..|  
 Worm   103 SYSYNEVNYWL---NSLVGGVAGTWAYL----LTPILQVSM--SCNRFYVLYFPFGIKLVKKVPM 158

  Fly   212 -GALVSWKTLSLLCLIIPILLLVGLFIV--PETPVYLLKNGKRSEANRALKWLWGDYCNTSNAIQ 273
             ..:::..:|| :.::....|..|...|  ||...::.:.||.:|                    
 Worm   159 TNVIITIASLS-VSIVAATTLPKGCGYVYDPEFLQWIPEEGKCAE-------------------- 202

  Fly   274 AIQNDLDQTGVDASVKDLFSNRASRNGMVISVLLMVFQQFSGIN-AVIFFMNEIFESSSTLNPNV 337
                                        .:|         |||| |:|.|         |::.|.
 Worm   203 ----------------------------TVS---------SGINYAIIIF---------TISSNS 221

  Fly   338 CTIVVGVVQVIMTLASSLLI-----------EKAGRKILLIFSSTIMTVCLAMLGAYNTINRHTD 391
            ..|..         ||.||:           .|..::.:::|..::|..||.::.:.|. .....
 Worm   222 FNIAT---------ASRLLMRKIVGLTKQDSSKRRKRWMIMFLQSVMQDCLHLVDSINA-TYLWK 276

  Fly   392 LSQSIGWLPLLCIVLFIVSFSVGYGPIPWMMMGELFMPDV---------KGIAVSLSVMMNWVCV 447
            ||:.: |..  ||.| .:||...|....::|:  :|..|:         ||...|..::.:.:.|
 Worm   277 LSEEL-WFQ--CIFL-TLSFITIYTLDGFVML--VFNQDIQPKWCRSGSKGERTSAMMVTSKISV 335

  Fly   448 SLVT 451
            :.:|
 Worm   336 TTMT 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 78/394 (20%)
MFS_1 96..443 CDD:284993 76/384 (20%)
srx-128NP_506426.3 7TM_GPCR_Srx 47..307 CDD:370981 71/360 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.