DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and F48E3.2

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_509266.1 Gene:F48E3.2 / 185981 WormBaseID:WBGene00018603 Length:488 Species:Caenorhabditis elegans


Alignment Length:500 Identity:120/500 - (24%)
Similarity:217/500 - (43%) Gaps:102/500 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 IICLGAVAAGTA---LSWTSPVFPQISAGNESSFNSTTGGISNSTSNENDIRLTDSQ-KTLVGSM 111
            ::.|.||.|.||   :.:|: .:|..:.|:...|       .|.::|| ...|::|: :....:|
 Worm     8 LLILSAVLAITAIFQMGYTN-AYPNTAIGSFRIF-------LNESANE-PYTLSNSEFEWAWSAM 63

  Fly   112 LP---FGALFGALPSGYIADRIGRRYT-----------------AMVMDIPFILAW----ITLSF 152
            |.   .|...|::.|..:||||||::|                 |:::.:|.:..:    ::||.
 Worm    64 LAIYFIGFAAGSVISAGVADRIGRKWTLFLGTCGSLLSSLIALFAIILKMPLMFGFSRLVMSLSA 128

  Fly   153 ANSVGWLYLGRFLIGIATGSFCVVAPMY----ISEIAETS--IRGSLGTLF--QLLLTIGILFIY 209
            |.|:..|.|          .|...:|.:    ||..||.:  |...:|.||  |.:|...|:.:.
 Worm   129 AISMNGLIL----------LFQESSPSHMRGLISFNAEMAFVITNLIGGLFGMQSILGQNIVGLI 183

  Fly   210 VVGALVSWKTLSLLCLIIPILLLVGLFIVPETPVYL-LKNGKRSEANRALKWLWGDYCNTS---- 269
            .|..:.|    |:.|.:...|        .|:|.|| ||....:||.|||::    |.|..    
 Worm   184 AVSIIPS----SVACFLTVFL--------KESPKYLFLKKHDATEAGRALQF----YQNIKDEEE 232

  Fly   270 --NAIQAIQNDLDQTG--VDASVKDLFSNRASRNGMVISVLLMVFQQFSGINAVIFFMNEIFES- 329
              |.:..::.:.::.|  .:.|:.|:.:|:..|.|.::.:..|  |..:.:..|:|:..:.... 
 Worm   233 KMNVLNDLKLEKEEMGHQKNGSLFDIMANQPVRRGFLLGLATM--QLTASVWPVVFYSTDFLMDA 295

  Fly   330 --SSTLNPNVCTIVVGVVQVIMTLASSLLIEKAGRKILLIFSSTIMTVCL------AMLGAYNTI 386
              |..|:.:|.|.:: .:..:.|:....::||..||.|||.::::....:      |:|..|.| 
 Worm   296 GFSYELSESVSTGML-FLSSLSTIVGMFIVEKYSRKWLLIGTASVNIAAILVFSLSAILSHYWT- 358

  Fly   387 NRHTDLSQSIGWLPLLCIVLFIVSFSVGYGPIPWMMMGELFMPDVKGIAVSLSVMMNWVCVSLVT 451
                    .||:..::|::|..:|:||..|||.|.:..||...:.:..:.||.:.:|.....::.
 Worm   359 --------WIGYGCIICLILHGISYSVAMGPIAWFITSELVPINFRAASQSLVLALNHTVALVLA 415

  Fly   452 WLFGVLNAGGADVPFWFFSAWMGVATAYVAIA-LQETKGKSASQI 495
            :|...|......:....|....|:....:.|. |.|||.|..:.|
 Worm   416 FLTFPLYKTIGPITLVIFFVIPGILCIIMLILYLPETKDKHINVI 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 100/436 (23%)
MFS_1 96..443 CDD:284993 95/397 (24%)
F48E3.2NP_509266.1 MFS_GLUT_Class1_2_like 12..455 CDD:340915 117/489 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52445
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

Return to query results.
Submit another query.