DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and Y61A9LA.1

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_504243.2 Gene:Y61A9LA.1 / 178849 WormBaseID:WBGene00022014 Length:526 Species:Caenorhabditis elegans


Alignment Length:541 Identity:113/541 - (20%)
Similarity:224/541 - (41%) Gaps:114/541 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 DSRNPITYDLLQENQSKTSKTRQ----YVAAMIICLGA-VAAGTALSWTSPVFPQISAGNESSFN 82
            ||:.|    |::.:.::..:...    ::.::.:||.: ...|...|..:..:.||.....||:.
 Worm    16 DSQAP----LIEADDAQRRRVMPSLSIHILSIALCLSSGFQQGYIASVLNQPYAQIEQFINSSWI 76

  Fly    83 STTG-GISNSTSNENDIRLTDSQKTLVGSML----PFGALFGALPSGYIADRIGRRYTAMVMDIP 142
            ..|| .||:||.:            |:.|:|    |...:||...:|::..:.||::||::....
 Worm    77 ERTGHPISDSTLH------------LLWSLLNVCFPIATIFGQFLAGWMCSQFGRKHTALIASFL 129

  Fly   143 FILAWITLSFANSVGW-------LYLGRFLIGIATGSFCVVAPMYISEIAETSIRGSLGTLFQLL 200
            :|...:..:.|.   |       |::||.:..:|.|...|.|.::|.|.|...|||.:..:.:..
 Worm   130 YIPGALLCAAAK---WCFPAFELLFVGRIIWSLANGVNTVNATVWIVECAPPQIRGRMAAMQEFF 191

  Fly   201 LTIGILFIYVVGALVS----WKTLSLLCLIIPILLLVGLFIVPETPVYLLKNGKRSEANRALKWL 261
            :.:|.|....||...|    |....|....:.::.:|....|.|:|.::::  |.::.:||.|.|
 Worm   192 MALGSLLTQAVGVPFSTDELWPYNFLPNCAVVVVSMVMFSWVAESPQFIME--KYNDVDRARKAL 254

  Fly   262 WGDYCNTSNAIQAIQNDL---DQT------------GVDAS------------VKDLFSNRASRN 299
             ..|...|....::::::   :|:            |:::.            .||. ::|..|.
 Worm   255 -AQYHGVSEDDPSVESEIRICEQSIGKNKEKKKTAGGIESEHSGMEIMFMPWRAKDQ-TSRLIRY 317

  Fly   300 GMVISVLLMVFQQFSGINA-------VIFFMNEIFESSSTLNPNVCTIVVGVVQVIMTLASSLLI 357
            ...:.|::.:...|:|..:       :::.::....|.:|.    .:...|::::..||....|:
 Worm   318 CAWVGVMVKIAYVFTGARSLRGYSTFILYTLSHFTYSQATW----LSFATGLLRLPFTLVPVFLV 378

  Fly   358 EKAGRKILLIFSSTIMTV-CLAMLGAYNTINRHTDLSQSIGWLPLLCIVLFIVSFSVGYGPIPWM 421
            ::.||:.|:|.|..:..| .|.|:.|.| ||.....:..||     ..||.:|: :.|.|.:...
 Worm   379 DRLGRRPLIIVSMLVSFVSILVMIIAIN-INGELKYATFIG-----LTVLLLVN-TCGIGSVSRF 436

  Fly   422 MMGELFMPDVKGIAVSLSVMMNWVCVSLVTWLFGVLNAGGADVPFW------------FFSAWMG 474
            ...||         |..:::::  .||.:| :|..|...|.:..|:            .|....|
 Worm   437 YAAEL---------VPRNLLLS--SVSTLT-MFEALTKIGVEFAFYPTANVIGAQSLLLFLIPTG 489

  Fly   475 VATAYVAIALQETKGKSASQI 495
            |.|....:...||...:.:::
 Worm   490 VFTVMCYLMCPETSRMTVNEV 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 93/447 (21%)
MFS_1 96..443 CDD:284993 82/396 (21%)
Y61A9LA.1NP_504243.2 MFS 42..504 CDD:391944 109/503 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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