DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and CG42826

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_001189079.1 Gene:CG42826 / 10178905 FlyBaseID:FBgn0262008 Length:473 Species:Drosophila melanogaster


Alignment Length:473 Identity:107/473 - (22%)
Similarity:181/473 - (38%) Gaps:111/473 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 QISAGNESSFNSTTGGIS---------NSTSNENDIRLTDSQKTLVGSMLPFGALFGALPSGYIA 127
            |.:|...:||...:||:|         :|...:..:|....|.....:.: .||||||    :..
  Fly    32 QWTALGSASFILISGGMSLAWGAGFAVHSAHRDQLLRTVHMQIAWYATAV-LGALFGA----FYT 91

  Fly   128 DRIGRRYTAMVMDIPFILAWIT-LSFANSVGWLYLGRFLIGIATGSFCVVAPMYISEIAETSIRG 191
            .|:.::...:...|..|.:.|. |::....|.:...|:|.|:|.|...|.|...:.||:...|||
  Fly    92 HRLPQQPIYIFSSILVIASGILFLAWPECPGAIIAARYLDGLANGLVFVPALSTVGEISVNEIRG 156

  Fly   192 SL-GTLFQLLLTIGIL--FIYVVGALVSWK----------TLSLLCLIIPILLLVGLFIVPETPV 243
            .| .|:.||....|||  .||.....|.|.          .||::..:|.:.|.:.|.:  |:||
  Fly   157 LLASTVEQLSFNTGILLQLIYTAVWQVDWNVAIVADQVHGVLSIVYGVIALALALTLCV--ESPV 219

  Fly   244 YLLKNGKRSEANRALKWLWGDYCNTSNAIQAIQNDLDQTGVDASVKDLFSNRASRNGMVI----- 303
            :||.......|..||:.|...|..||..:..:         |...:.:..||....|..:     
  Fly   220 HLLMRSSEQRALVALRHLQRPYMVTSEMLLRL---------DEHKQYVADNREMCLGSSLQKGYP 275

  Fly   304 SVLLMVFQQFSGI---NAVIFFMNEIFESSSTLNPNVCT-----IVVGVVQVIMTLASSLLIEKA 360
            |||.::..:..|:   |::|  .:.::|:.:.|..  |.     :|.|:::......:.||::..
  Fly   276 SVLKLLALRLLGVLSLNSII--CSALYETGNQLVS--CLYAWPFVVFGLLRWGGCFFAVLLMDTT 336

  Fly   361 GRK---ILLIFSSTIMTVCLAMLGAYNTINRHTDLSQSIGWLPLLCIVLFIVSFSVGYGP----- 417
            |||   :..|||:....:..|     |...|...:..::       ::||.:.|..|.|.     
  Fly   337 GRKKPTLFGIFSTGAFAIAYA-----NLFGRTPHMITAL-------VMLFSLQFFEGLGQCASAV 389

  Fly   418 -----IPWMMMGEL-----------------FMPDVKGIAVSLSVMMNWVCVSLVTWLFGV---- 456
                 .|.:|...:                 |:|.:..|......|   ..:|:|.:|.|:    
  Fly   390 YLTEGFPLLMKPHMVAVVYIMEQAARLLLCSFLPSIAEITAYFHSM---GALSMVCFLLGIFCLP 451

  Fly   457 ----LNAGGADVPF--WF 468
                :....|.:.|  ||
  Fly   452 ETRLVTLAEAQLKFSKWF 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 99/440 (23%)
MFS_1 96..443 CDD:284993 91/403 (23%)
CG42826NP_001189079.1 Sugar_tr 80..465 CDD:278511 94/419 (22%)
MFS 310..>459 CDD:119392 28/163 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444534
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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