DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1208 and slc2a13

DIOPT Version :9

Sequence 1:NP_001097692.1 Gene:CG1208 / 40727 FlyBaseID:FBgn0037386 Length:502 Species:Drosophila melanogaster
Sequence 2:XP_004913061.2 Gene:slc2a13 / 100485871 XenbaseID:XB-GENE-492054 Length:646 Species:Xenopus tropicalis


Alignment Length:498 Identity:114/498 - (22%)
Similarity:195/498 - (39%) Gaps:104/498 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 QKTLVGSMLPFGALFGALPSGYIADRIGRRYTAMVMDIPFILAWITLSFANSVGWLYLGRFLIGI 168
            |:.||.|.:...|| .||..|.:...:|||...::..:.|....:.|:.|.....|..||.::|:
 Frog   118 QELLVSSTVGAAAL-SALAGGVLNGVLGRRPCILMASLLFTAGAVILAAARDKETLLGGRVVVGL 181

  Fly   169 ATGSFCVVAPMYISEIAETSIRGSLGTLFQLLLTIGILFIYVVGALVS------WKTLSLLCLII 227
            ..|...:..|:||:|.|...:||.|.|:..|.:|.|.....||....|      |:.:..|..:.
 Frog   182 GIGIASMTVPVYIAEAAPPHLRGRLVTINTLFITGGQFSAAVVDGAFSYLARDGWRYMLGLSAVP 246

  Fly   228 PILLLVGLFIVPETPVYLLKNGKRSEANRALKWLWGDYCNTSNAIQAIQNDLDQTGVDAS----- 287
            .:|..:|...:||:|.:|::.|:..:|.|.|..:.|:. .......:|:|.:|:...:.:     
 Frog   247 AVLQFLGFLFLPESPRWLIQKGQTQKARRVLSQIRGNQ-TIDEEYDSIKNSIDEEEKEGATGGPI 310

  Fly   288 VKDLFSNRASRNGMVISVLLMVFQQFSGINAVIFFMNEIFESSSTLNPNVC---TIVVGVVQVIM 349
            :..:.....:|..:::...|.:|||.:|||.|:::...|.:.|...:..:.   ..|........
 Frog   311 IYRMLIYPPTRRALIVGCGLQMFQQLAGINTVMYYSATILQMSGVDDDRLAIWLAAVTAFTNFSF 375

  Fly   350 TLASSLLIEKAGRKILLIFSSTIMTVCLAMLG----------------------------AYNTI 386
            ||....|:||.||:.|.:.|.|..||.|.:|.                            .|:..
 Frog   376 TLLGVWLVEKLGRRKLTLGSLTGTTVALFVLALGFLLSAQVSPPVTFTPGDPSGPNSTCTQYSYC 440

  Fly   387 NR-----------------------------HTDLS------------------------QSIGW 398
            |:                             .||.:                        .|..|
 Frog   441 NKCMLDPNCGFCYKKNGSSIVDSSCIPVNTESTDRAAWGRCMNETKSKAGGSIWAYNYCPTSYSW 505

  Fly   399 LPLLCIVLFIVSFSVGYGPIPWMMMGELFMPDVKGIAVSLSVMMNWVCVSLVTWLF----GVLNA 459
            ..||.::|::|.|:.|.||:||.:..|::....:....:.|..:||:|..|::..|    ..|..
 Frog   506 TALLGLILYLVFFAPGMGPMPWTVNSEIYPLWARSTGNACSSGVNWICNVLISLTFLHTAEYLTY 570

  Fly   460 GGADVPFWFFSAWMGVATAYVAIALQETKGKSASQIQSWLSGR 502
            .||   |:.::....|...::...|.|||||...:|:|....|
 Frog   571 YGA---FFLYAGLACVGLIFIYGCLPETKGKKLEEIESLFESR 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1208NP_001097692.1 MFS 96..482 CDD:119392 105/476 (22%)
MFS_1 96..443 CDD:284993 95/433 (22%)
slc2a13XP_004913061.2 MFS_HMIT_like 85..594 CDD:340918 106/480 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D524131at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X729
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.