DRSC/TRiP Functional Genomics Resources

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Protein Alignment glob3 and xgb

DIOPT Version :10

Sequence 1:NP_649597.3 Gene:glob3 / 40726 FlyBaseID:FBgn0037385 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_001012261.2 Gene:xgb / 497122 ZFINID:ZDB-GENE-050125-1 Length:200 Species:Danio rerio


Alignment Length:197 Identity:39/197 - (19%)
Similarity:79/197 - (40%) Gaps:37/197 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ISLSSLTYPKRIPKIKFGPIKDEMGFTLSERLALRQAWNLVRPFERRYG--------------QD 61
            ||.|.||  .|.|:|:.|..:...|.|.:....::::|.|::....:.|              :|
Zfish     5 ISGSGLT--ARAPEIRAGEEETPAGLTANHIRLIKESWRLIQEDIAKVGIIMFVRLFETHPECKD 67

  Fly    62 VFYSF--LNDYYWGIKKFRNGAELNVKALHSHALRFINFFGLLIEEKDPVV-FQLMINDNNHTHN 123
            ||:.|  :.|    :::.|...|     |.:|.||.::|....:...|.:. .:.:..:...:|.
Zfish    68 VFFLFRDVED----LERLRTSRE-----LRAHGLRVMSFIEKSVARLDQLERLETLALELGKSHY 123

  Fly   124 RCHVGSVNIGHLAQALVDYVLKVFHKVSSPSLEQGLSKLVEK---------FQNYQDQQSNTSGY 179
            |.:......|::....:..|..:.....:|.||:....|.:.         .:..::::|||...
Zfish   124 RYNAPPKYYGYVGAEFICAVRPILKDRWTPELEEAWKTLFQYVTSIMREGFLEEERNKRSNTQTS 188

  Fly   180 NR 181
            :|
Zfish   189 SR 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glob3NP_649597.3 Mb-like 44..169 CDD:381254 24/150 (16%)
xgbNP_001012261.2 GbX 28..173 CDD:271287 25/153 (16%)

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