DRSC/TRiP Functional Genomics Resources

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Protein Alignment dgrn and AT2G23780

DIOPT Version :10

Sequence 1:NP_649596.1 Gene:dgrn / 40725 FlyBaseID:FBgn0037384 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_179958.1 Gene:AT2G23780 / 816910 AraportID:AT2G23780 Length:227 Species:Arabidopsis thaliana


Alignment Length:60 Identity:18/60 - (30%)
Similarity:31/60 - (51%) Gaps:13/60 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 NRDIDESQKEELYKCPICMDSVSKREPVSTKCGHVFCRECIETAIRATH------KCPIC 305
            |.|.::...:  ::|.||.:..  ::|:.|.|||:||..|:   .|..|      :||:|
plant    16 NNDTNDQGGD--FECNICFELA--QDPIVTLCGHLFCWPCL---YRWLHHHSHSQECPVC 68

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dgrnNP_649596.1 PEX10 <182..308 CDD:227861 18/60 (30%)
RING_Ubox 264..315 CDD:473075 16/48 (33%)
AT2G23780NP_179958.1 RING-HC_AtRMA-like 26..70 CDD:438403 16/48 (33%)

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