DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dgrn and Pex10

DIOPT Version :10

Sequence 1:NP_649596.1 Gene:dgrn / 40725 FlyBaseID:FBgn0037384 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001102875.1 Gene:Pex10 / 680424 RGDID:1591776 Length:324 Species:Rattus norvegicus


Alignment Length:263 Identity:61/263 - (23%)
Similarity:99/263 - (37%) Gaps:70/263 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 PVERDLSVESDSSSATNTSESSVGEASNQLQSPQSNNPLNMANLSVSTEDAHSQIRSLTQDVI-- 137
            |:|::|..|.|.:.|:..|....|.:.:..:....::...:      ||   .|.|:|.:.|.  
  Rat   110 PLEQELQAEGDGTRASQGSLLPGGRSRSGARRWVRHHAATL------TE---QQRRALQRAVFIL 165

  Fly   138 -QMEAELDRMNRYCEEVVAQIDTFATRTSTPTTRRIRRRTSPVE------------VIDLSHLDR 189
             |..|.|.|::.....:.......|.|.:..|..|.||  .|.|            :|.|.||..
  Rat   166 RQGFACLHRLHVAWFYIHGTFYHLAKRLAGITYLRTRR--LPGEDLRACTSYRLLGLISLLHLAL 228

  Fly   190 APPVR--SARNRDPDAFIDLCTPEGPRSRTV-NLHSNDSLTILPRRSAENDPVVDLDVASPPKRV 251
            :..::  |.|.:.             |:|.. .||.|    :..|||:..|..|   ..:|    
  Rat   229 SLGLQLYSFRQKQ-------------RARKEWRLHRN----LSHRRSSLEDRAV---CRAP---- 269

  Fly   252 NRDIDESQKEELYKCPICMDSVSKREPVSTKCGHVFCRECIETAIRATHKCPICNKKLTARQFFR 316
                         .|.:|::  .:|...:|.|||:||.|||........:||:|.:|...::.  
  Rat   270 -------------LCTLCLE--ERRHSTATPCGHLFCWECITEWCNTKTECPLCREKFPPQKL-- 317

  Fly   317 IYL 319
            :||
  Rat   318 VYL 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dgrnNP_649596.1 PEX10 <182..308 CDD:227861 32/128 (25%)
RING_Ubox 264..315 CDD:473075 16/50 (32%)
Pex10NP_001102875.1 Pex2_Pex12 16..216 CDD:398431 26/116 (22%)
RING-HC_PEX10 271..320 CDD:438190 16/52 (31%)

Return to query results.
Submit another query.