DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dgrn and btr24

DIOPT Version :10

Sequence 1:NP_649596.1 Gene:dgrn / 40725 FlyBaseID:FBgn0037384 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_017207881.1 Gene:btr24 / 100000030 ZFINID:ZDB-GENE-070705-376 Length:555 Species:Danio rerio


Alignment Length:59 Identity:26/59 - (44%)
Similarity:34/59 - (57%) Gaps:5/59 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 EELYKCPICMDSVSKREPVSTKCGHVFCRECIETAIR--ATHKCPICNKKLTARQFFRI 317
            ||| :|.||:|..:  :||||.|||.||:.|:.|...  .|..||.||:..|.|...:|
Zfish    35 EEL-QCSICLDVFT--DPVSTPCGHNFCKSCLNTCWNNSQTCSCPYCNETFTQRPDLKI 90

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dgrnNP_649596.1 PEX10 <182..308 CDD:227861 23/48 (48%)
RING_Ubox 264..315 CDD:473075 22/52 (42%)
btr24XP_017207881.1 RING_Ubox 32..100 CDD:473075 26/59 (44%)
Bbox_SF 114..161 CDD:469587
Bbox2_TRIM16-like 165..201 CDD:380827
SPRY_PRY_C-I_1 379..553 CDD:293968
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.