DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec20 and bnip1

DIOPT Version :10

Sequence 1:NP_649595.1 Gene:Sec20 / 40724 FlyBaseID:FBgn0037383 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_001072901.1 Gene:bnip1 / 780363 XenbaseID:XB-GENE-977996 Length:227 Species:Xenopus tropicalis


Alignment Length:229 Identity:72/229 - (31%)
Similarity:126/229 - (55%) Gaps:11/229 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DKDAFTLQAIRQDLIDNNLQAKAIIHDILNSRTSIAELEELNEAGRSKLSAIRKSIERLDDWA-- 64
            |.....::...|:::..:|:.||:|.||......::.|.:.|...:.|...:|..|:..:..|  
 Frog     3 DSQDVHVRICHQEIVKYDLEIKALIQDIRECPGPLSTLNDFNAQVKEKFHLLRLRIQDFEQLAKE 67

  Fly    65 --RDTADSALANEVDDHRDQFSKTLQAFRKANVSTMLEIEKANREELMAITGESELRQRTTTRAR 127
              :::...||..|::.|:.|.......:||||:|....|:.|.::||  :.|....|||..  |:
 Frog    68 QDKESDKQALLKEMECHKKQMLSNQTVWRKANLSCKQAIDNAEKDEL--LDGGDPTRQRKV--AK 128

  Fly   128 HNQGSLVSQENDVTEKMLAISRHLSETTQKSAITLETLVASSQNVEATSDELHHTAGSISMSGKL 192
            .|   |....:::||.::.|||.:::...:|.:|::||..||:.::..::|....:|:|.:..||
 Frog   129 EN---LAQSTSNITESLMGISRMMAQQVGQSEVTMQTLATSSRTIQEANEEFKSMSGTIQLGRKL 190

  Fly   193 LKKYGRRECTDKMLLFFAFSLFLACVFYIVQKRL 226
            :.||.|||.|||:|:|.|.:||||.|.||::|||
 Frog   191 ITKYNRRELTDKLLIFLALALFLATVLYILKKRL 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec20NP_649595.1 Sec20 135..226 CDD:112708 35/90 (39%)
bnip1NP_001072901.1 SNARE_SEC20 132..224 CDD:277218 35/91 (38%)

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