DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42675 and zc2hc1c

DIOPT Version :10

Sequence 1:NP_001262302.1 Gene:CG42675 / 40722 FlyBaseID:FBgn0261561 Length:427 Species:Drosophila melanogaster
Sequence 2:XP_068070792.2 Gene:zc2hc1c / 799591 ZFINID:ZDB-GENE-111020-1 Length:484 Species:Danio rerio


Alignment Length:471 Identity:122/471 - (25%)
Similarity:180/471 - (38%) Gaps:137/471 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 FESELGQ--------DHILPLKLNESWAARRLMEALSHLPPSGNSST--NSAPMRFQQRTQQEQE 74
            :|.|..|        |.:.|||.    ...:...:||::|...:..|  ..|.:|.||:..::.:
Zfish    84 YEEEQNQYVPSRRESDRLFPLKP----VLHKRAYSLSNIPKPDHYPTLAEQAALRHQQKMVRKLD 144

  Fly    75 VRRRELMSTKSSAENLATGAPSAATTRLI----------------GNGKVRQMFDERRR------ 117
            .:.:.:.:..||.|..:    |...|||.                ....||::..||.:      
Zfish   145 AQDQHIPARTSSHEQKS----SETHTRLSKEIHSKEMMLQQKIFRAEETVRRVQRERNKRFFEKQ 205

  Fly   118 -----------GAGIDRSNPLKPIGTLPSPPAQTKSRPQPPMQRLVKGVADLTMRDA-PNAPGRR 170
                       |.|                   .....:..|:|       ..:||| .:..|:.
Zfish   206 LDDRLYSDWYEGTG-------------------RYENERDDMER-------WEIRDAKQHTRGQL 244

  Fly   171 ITSDSNNNKFATPR----GTLNRNLKPVVTRKTPPAQETTLH---QRSPAPQRSPKIQATQRVSG 228
            :||:  ..|...||    .|.:..|:.:..|:   .:|.||:   :|.....|....::|:|...
Zfish   245 LTSE--RVKDHVPREWDDTTKDWGLEKINIRR---EREMTLNNHVRRRRETDREDLRKSTRRDGS 304

  Fly   229 ----GTGAAPTA-GRLSPPFVRRAEPKSPVKKVNMDTT-TAIPEGTALCRYCGRHFNTDRLAKHE 287
                ..||...| |:||   .||...||..:....:.. ..||     |..|.|.|..:||..|.
Zfish   305 QRRHDRGADEDALGQLS---YRRLNAKSAGRDDGEENAELLIP-----CSVCQRCFAPERLETHM 361

  Fly   288 EVCQRMLTTKRKIFDASKQRIEGTEAAAFNMKSKGNRNRSTYSSAAQQKGLTTGVKKNNWRKKHE 352
            .||::. ..:||:||.||.|..|||...| ||: .:|:|            |...|||.||:|||
Zfish   362 RVCEKK-RPQRKVFDMSKYRARGTELEEF-MKT-NSRSR------------TPERKKNMWRQKHE 411

  Fly   353 DFIQSIRAAKQVKAHLARGGKLSDLPPPPPSENPDYVQCPHCGRRFNEQAAERHIPKCVNMVHNK 417
            .|||::|..:         ...|..|......:.:|:.||||||:|....||||:|||..:   |
Zfish   412 AFIQTMRQGR---------SSTSQQPNSTSGLHQEYITCPHCGRKFAPGPAERHVPKCQTI---K 464

  Fly   418 PRNGPP------AKRR 427
            .|..||      |.||
Zfish   465 SRPAPPKQPHNSATRR 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42675NP_001262302.1 PHA03247 <115..269 CDD:223021 36/184 (20%)
zf-C2HC_2 271..291 CDD:464037 8/19 (42%)
zf-C2HC_2 389..410 CDD:464037 12/20 (60%)
zc2hc1cXP_068070792.2 None

Return to query results.
Submit another query.