DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42675 and zc2hc1c

DIOPT Version :9

Sequence 1:NP_001262302.1 Gene:CG42675 / 40722 FlyBaseID:FBgn0261561 Length:427 Species:Drosophila melanogaster
Sequence 2:XP_001339930.3 Gene:zc2hc1c / 799591 ZFINID:ZDB-GENE-111020-1 Length:464 Species:Danio rerio


Alignment Length:467 Identity:112/467 - (23%)
Similarity:168/467 - (35%) Gaps:129/467 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 FESELGQ--------DHILPLKLNESWAARRLMEALSHLPPSGNSST--NSAPMRFQQR------ 68
            :|.|..|        |.:.|||.    ...:...:||::|...:..|  ..|.:|.||:      
Zfish    64 YEEEQNQYVPSRRESDRLFPLKP----VLHKRAYSLSNIPKPDHYPTLAEQAALRHQQKMVRKLD 124

  Fly    69 ---------------------TQQEQEVRRRELMSTKS--SAENLATGAPSAATTRLIGNGKVRQ 110
                                 |:..:|:..:|:|..:.  .||............|..|.....:
Zfish   125 AQDQHIPARTSSHEQKSSETHTRLSKEIHSKEMMLQQKIFRAEETVRRVQRERNKRFFGKQLDDR 189

  Fly   111 MFDERRRGAGIDRSNPLKPIGTLPSPPAQTKSRPQPPMQRLVKGVADLTMRDA-PNAPGRRITS- 173
            ::.:...|.|                   .....:..|:|       ..:||| .:..|:.:|| 
Zfish   190 LYSDWYEGTG-------------------RYENERDDMER-------WEIRDAKQHTRGQLLTSE 228

  Fly   174 ----------DSNNNKFATPRGTLNRNLKPVVTRKTPPAQETTLHQRSPAPQRSPKIQATQRVSG 228
                      |.....:...:..:.|..:..:.......:||.......:.:|...::...|   
Zfish   229 RVKDHEPREWDDTTKDWGLEKINIRREREMTLNNHVRRRRETDREDLRKSTRRDGSLRRHDR--- 290

  Fly   229 GTGAAPTA-GRLSPPFVRRAEPKSPVKKVNMDTT-TAIPEGTALCRYCGRHFNTDRLAKHEEVCQ 291
              ||...| |:||   .||...||..:....:.. ..||     |..|.|.|..:||..|..||:
Zfish   291 --GADEDASGQLS---YRRLNAKSAGRDDGEENAELLIP-----CSVCRRCFAPERLETHMRVCE 345

  Fly   292 RMLTTKRKIFDASKQRIEGTEAAAFNMKSKGNRNRSTYSSAAQQKGLTTGVKKNNWRKKHEDFIQ 356
            :. ..:||:||.||.|..|||...| ||: .:|:|            |...|||.||:|||.|||
Zfish   346 KK-RPQRKVFDMSKYRARGTELEEF-MKT-NSRSR------------TPERKKNMWRQKHEAFIQ 395

  Fly   357 SIRAAKQVKAHLARGGKLSDLPPPPPSENPDYVQCPHCGRRFNEQAAERHIPKCVNMVHNKPRNG 421
            ::|..:         ...|..|......:.:|:.||||||:|....||||:|||..:   |.|..
Zfish   396 TMRQGR---------SSTSQQPNSTSGLHQEYITCPHCGRKFAPGPAERHVPKCQTI---KSRPA 448

  Fly   422 PP------AKRR 427
            ||      |.||
Zfish   449 PPKQPHNSATRR 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42675NP_001262302.1 zf-C2HC_2 271..291 CDD:290624 8/19 (42%)
zf-C2HC_2 389..410 CDD:290624 12/20 (60%)
zc2hc1cXP_001339930.3 zf-C2HC_2 322..345 CDD:290624 10/27 (37%)
zf-C2HC_2 417..441 CDD:290624 14/23 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3940
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_108928
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1390
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.710

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