DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42675 and Zc2hc1a

DIOPT Version :10

Sequence 1:NP_001262302.1 Gene:CG42675 / 40722 FlyBaseID:FBgn0261561 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001415885.1 Gene:Zc2hc1a / 67306 MGIID:1914556 Length:363 Species:Mus musculus


Alignment Length:165 Identity:72/165 - (43%)
Similarity:92/165 - (55%) Gaps:27/165 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 CRYCGRHFNTDRLAKHEEVCQRMLTTKRKIFDASKQRIEGTEAAAFN-MKSKGNRNRSTYSSAAQ 334
            |:.|||.|....|.||..:||:..|.|||.||:|:||.|||:..... :|.:....:        
Mouse    19 CKICGRTFFPLALKKHGPICQKTATKKRKTFDSSRQRAEGTDIPTVKPLKPRPEPPK-------- 75

  Fly   335 QKGLTTGVKKNNWRKKHEDFIQSIRAAKQVKAHLARGGKLSDLPPPPPSENPDYVQCPHCGRRFN 399
                    |.:|||:|||:||.:|||||.:...|..||||.  ||||||.:|||:|||:|.||||
Mouse    76 --------KPSNWRRKHEEFIATIRAAKGLDQALKEGGKLP--PPPPPSYDPDYIQCPYCQRRFN 130

  Fly   400 EQAAERHIPKCVNM---VHNKPR-----NGPPAKR 426
            |.||:|||..|...   :.||.:     .|.||.|
Mouse   131 ENAADRHINFCKEQAARISNKGKFSTDSKGKPASR 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42675NP_001262302.1 PHA03247 <115..269 CDD:223021
zf-C2HC_2 271..291 CDD:464037 8/19 (42%)
zf-C2HC_2 389..410 CDD:464037 14/20 (70%)
Zc2hc1aNP_001415885.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.