DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42675 and zc2hc1c

DIOPT Version :10

Sequence 1:NP_001262302.1 Gene:CG42675 / 40722 FlyBaseID:FBgn0261561 Length:427 Species:Drosophila melanogaster
Sequence 2:XP_031747555.1 Gene:zc2hc1c / 100492184 XenbaseID:XB-GENE-940099 Length:543 Species:Xenopus tropicalis


Alignment Length:524 Identity:147/524 - (28%)
Similarity:201/524 - (38%) Gaps:167/524 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LLQYDFESELGQDHILPLKLNESWAARRLMEALSHLP-PSGNSSTNSAPMRFQQRTQQEQE---- 74
            ::||   ||:..:..||:...|             || |...|.......::|:|..:|:|    
 Frog    76 VVQY---SEVMYETKLPMLKRE-------------LPAPKSLSKLERMRNQYQERVSKEKEEKLL 124

  Fly    75 ------------------VRRRELMSTKSSAENLATGAPSAATTRLIGNGKVRQMFDERRRGAGI 121
                              :...||.....|..|:....||..|.:..........:...:|.||:
 Frog   125 TLFTKQQEHTTQKVHGSSLHTEELRHNPRSNFNVHHNPPSLYTAQWPEEKNWASNWIVSKRSAGV 189

  Fly   122 DRSNPLKPIG---------------------------TLPSPP--AQTKSRPQPP---------- 147
            ||::||||:.                           |:|.|.  .:.||.|..|          
 Frog   190 DRAHPLKPVFHPKDQRSVRTETSLYRSQSASSAGNKLTIPHPEEHIRLKSGPSRPEVWFQLQNSE 254

  Fly   148 ---------------------------MQRLVKGVADLTMRDAPNAPGRRITS---DSNNNKF-- 180
                                       :|| .|.||:|........|.|..|.   |....|:  
 Frog   255 LSLEAEIRRKKALLKEKLRRTEEELRRIQR-EKEVAELEDTTVQGIPERNRTMGKLDEQVGKYLH 318

  Fly   181 ----------ATPRGTLNRNLKPVVTRKTPPAQETTLHQRSPAPQ-----RSPKIQATQRVSGGT 230
                      .:.|...|:||.|  ..|.|...:...:..:...|     |||:..|.       
 Frog   319 NLDFTLKAKEKSSRHFRNQNLMP--KEKDPQTNQEVPNNMTEKEQPVYRGRSPQYAAN------- 374

  Fly   231 GAAPTAGRLSPPFVRRAEPKSPVKKVNMDTTTAIPEGTAL--CRYCGRHFNTDRLAKHEEVCQRM 293
                         .:..|.:...|.|..|.... |..|.|  |..|||.|...||.||.:|||:|
 Frog   375 -------------FKEEEKRQMPKDVPQDDAPE-PSATELLPCNLCGRQFLAHRLEKHTQVCQKM 425

  Fly   294 LTTKRKIFDASKQRIEGTEAAAFNMKSKGNRNRSTYSSAAQQKGLTTGVKKNNWRKKHEDFIQSI 358
            ..:.||:||:||.|.:|||...: :::||....:           ...|:.|.||:|||.|.|:|
 Frog   426 QKSNRKVFDSSKARAKGTELEQY-LQTKGKTRPN-----------VPKVQSNAWRQKHESFQQTI 478

  Fly   359 RAAKQVKAHLARGGKLSDLPPPPPSENPDYVQCPHCGRRFNEQAAERHIPKCVNMVHNKPRNGPP 423
            |.|:.|:..:|:||||||||||||.||||||.||||.|||..:.||||||||.| :.:|||   |
 Frog   479 RHARTVQQVIAKGGKLSDLPPPPPEENPDYVTCPHCNRRFAPRVAERHIPKCEN-IKSKPR---P 539

  Fly   424 AKRR 427
            .:||
 Frog   540 LRRR 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42675NP_001262302.1 PHA03247 <115..269 CDD:223021 44/239 (18%)
zf-C2HC_2 271..291 CDD:464037 10/19 (53%)
zf-C2HC_2 389..410 CDD:464037 14/20 (70%)
zc2hc1cXP_031747555.1 zf-C2HC_2 399..423 CDD:464037 11/23 (48%)
zf-C2HC_2 509..531 CDD:464037 15/21 (71%)

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