Protein Alignment Rpn5 and psmd12

DIOPT Version :9

• Sequence 1: NP_649588.1
• Gene: Rpn5 / 40717
• FlyBaseID: FBgn0028690
• Length: 502
• Species: Drosophila melanogaster
• Sequence 2: NP_001016001.1
• Gene: psmd12 / 548755
• XenbaseID: XB-GENE-970352
• Length: 441
• Species: Xenopus tropicalis
• Alignment Length: 490
• Identity: 224/490 - (45%)
• Similarity: 316/490 - (64%)
• Gaps: 57/490 - (11%)

  Fly    14 MEVDYEPACNEKIPLAKELAKKNPDAFHEAIEMMLQLEKQTRLGADMVSCSRVLVAICQICFDAS 78
            |||||....::::|..:::|.:.  ...|.:|::|.||||||..:||||.||:|||:.::|::|.
 Frog     1 MEVDYSSTVDQRLPECEKMAGEG--RLQEVVEILLSLEKQTRTASDMVSTSRILVAVVKMCYEAK 63

  Fly    79 NWNALNEYVSLLVRRRSQLKQAVVKMIQECVTYVDKTPDKETKLKLIDTLRSVTEGKIYVEIERA 143
            .|:.|||.:.||.:|||||||||.||:|:|..||::..|...||:||||||:|||||||||||||
 Frog    64 EWDLLNENIMLLSKRRSQLKQAVAKMVQQCCQYVEELTDLPIKLRLIDTLRTVTEGKIYVEIERA 128

  Fly   144 RLTKILADIKEADGDVAGAATVMEELQVETYGSMDKREKVELILEQMRLCLLKEDYVSTQIIAKK 208
            ||||.||.|||..|||..||::::||||||||||:|:||||.|||||||||..:||:.||||:||
 Frog   129 RLTKTLAAIKEQSGDVQEAASILQELQVETYGSMEKKEKVEFILEQMRLCLAVKDYIRTQIISKK 193

  Fly   209 ISIKFFDDPAQHDLKLKFYYLMIQLNR-DTSFLNTSRHYQAIAEPPRKKTGLTPVDSAASTDEQK 272
            |:.|||.:......|||:|.||||::: :.|:|:..:||:||.:        ||...|
 Frog   194 INTKFFKEENTEKPKLKYYNLMIQVDQHEGSYLSICKHYRAIYD--------TPCIQA------- 243

  Fly   273 KKDDDKKKKEEDDKDKKPEVATEAEVEIELTEEQKKELTEKLVCAVLYCVLAPFDNEQSDMMAHL 337
                      |.||                       ....|...|||.:|:|:||||||::..:
 Frog   244 ----------ESDK-----------------------WQHALKSVVLYVILSPYDNEQSDLVHRI 275

  Fly   338 SKNKKLEEVPAYKEILRLFMSKELINFDTFNADFGLVLAENEMFKDST------KHGKKCITELK 396
            |.:||||::|.||::|:||.:.||:.:.|...|:|..|.|..:...:|      :.|:|...:||
 Frog   276 SADKKLEDIPKYKDLLKLFTTMELMRWSTLVEDYGKELREGSLDSSATDVFSCSEEGEKRWKDLK 340

  Fly   397 DRLIEHNIRIIAMYYSRLHLARMSELLNLPTSRCEEYLSKLANTDTIRVKIDRPAGIIYFTQKKS 461
            :|::||||||:..||:|:.:.||::||:|.....||:||.|....||..|:||.||||.|.:.|.
 Frog   341 NRVVEHNIRIMEKYYTRITMKRMAQLLDLSVDESEEFLSSLVVNKTIYAKVDRLAGIINFQRPKD 405

  Fly   462 ASDILNNWATDVNQLMSLVNKTCHLINKEECVYSV 496
            .:|:||:|:..:|.||:|||||.|||.|||.::::
 Frog   406 PNDLLNDWSQKLNSLMALVNKTTHLIAKEEMIHNL 440

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn5	NP_649588.1	RPN5	13..496	CDD:227403	224/488 (46%)
psmd12	NP_001016001.1	RPN5	2..441	CDD:227403	223/489 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	287	1.000	Domainoid score	I1574
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	415	1.000	Inparanoid score	I1790
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0003700
OrthoInspector	1	1.000	-	-		oto103532
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X2567
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	5.050