Protein Alignment Rpn5 and CSN4

DIOPT Version :9

• Sequence 1: NP_649588.1
• Gene: Rpn5 / 40717
• FlyBaseID: FBgn0028690
• Length: 502
• Species: Drosophila melanogaster
• Sequence 2: NP_001163080.1
• Gene: CSN4 / 35759
• FlyBaseID: FBgn0027054
• Length: 407
• Species: Drosophila melanogaster
• Alignment Length: 467
• Identity: 97/467 - (20%)
• Similarity: 189/467 - (40%)
• Gaps: 103/467 - (22%)

  Fly    34 KKNPDAFHEAIEMMLQLEKQTRLGADMVSCSRVLV-AICQICFDASNWNALNEYVSLLVRRRSQL 97
            |...|.:.:.::.:|     |..|.:::...|:.| ||            :||:|||::.|
  Fly    27 KDQADKYRQLLKTVL-----TNTGQELIDGLRLFVEAI------------VNEHVSLVISR---- 70

  Fly    98 KQAVVKMIQECVTYVDKTPDKETKLKLIDTLRSVTEGKIYVEIERARLTKILADIKEADGDVAGA 162
                 :::.:..:.:.|.||..:|:....||..|....|..|.:.|.:...||:|.|.:.....|
  Fly    71 -----QILNDVGSELSKLPDDLSKMLSHFTLEKVNPRVISFEEQVAGIRFHLANIYERNQQWRDA 130

  Fly   163 ATVMEELQVETYGSMDKRE-KVELILEQMRLCLLKEDYVSTQIIAKKISIKFFDDPAQH-DLKLK 225
            |||:..:.:||.......| |:...|:..||.|...|.|..::...:.|:...:..::. .:..|
  Fly   131 ATVLVGIPLETGQKQYSVECKLGTYLKIARLYLEDNDSVQAELFINRASLLQAETNSEELQVLYK 195

  Fly   226 FYYLMIQLNRDTSFLNTSRHYQAIAEPPRKKTGLTPVDSAASTDEQKKKDDDKKKKEEDDKDKKP 290
            ..|..: |:....|:..::.|..::.  ||     .||..
  Fly   196 VCYARV-LDYRRKFIEAAQRYNELSY--RK-----IVDQG------------------------- 227

  Fly   291 EVATEAEVEIELTEEQKKELTEKLVCAVLYCVLAPFDNEQSDMMAHLSKNKKLEEVPAYKEILRL 355
                          |:...|.:.|:|.    |||....::|.|:|.|.|:::.:.:|||..:.::
  Fly   228 --------------ERMTALKKALICT----VLASAGQQRSRMLATLFKDERCQHLPAYGILEKM 274

  Fly   356 FMSK-----ELINFDTFNADFGLVLAENEMFKDSTKHGKKCITELKDRLI-EHNIRIIAMYYSRL 414
            ::.:     ||..|:.       :|.:::  |.:|..|    :.:.||.: |||:...:..|:.:
  Fly   275 YLERIIRRSELQEFEA-------LLQDHQ--KAATSDG----SSILDRAVFEHNLLSASKLYNNI 326

  Fly   415 HLARMSELLNLPTSRCEEYLSKLANTDTIRVKIDRPAGIIYFTQKKSASDILNNWATDVNQLMSL 479
            ....:..||::|..:.|:..|::.....:...||:.:.|::|..:    ::|..|...:..|...
  Fly   327 TFEELGALLDIPAVKAEKIASQMITEGRMNGHIDQISAIVHFENR----ELLPQWDRQIQSLCYQ 387

  Fly   480 VNKTCHLINKEE 491
            ||.....|:..|
  Fly   388 VNSIIEKISVAE 399

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn5	NP_649588.1	RPN5	13..496	CDD:227403	97/467 (21%)
CSN4	NP_001163080.1	RPN5	<95..384	CDD:227403	73/356 (21%)
		PCI	271..369	CDD:279707	21/110 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45447373
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR10855
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940