DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpn5 and rpn502

DIOPT Version :9

Sequence 1:NP_649588.1 Gene:Rpn5 / 40717 FlyBaseID:FBgn0028690 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_594776.1 Gene:rpn502 / 2543347 PomBaseID:SPAPB8E5.02c Length:443 Species:Schizosaccharomyces pombe


Alignment Length:490 Identity:169/490 - (34%)
Similarity:273/490 - (55%) Gaps:54/490 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KMEVDYEPACNEKI-PLAKELAKKNPDAFHEAIEMMLQLEKQTRLGADMVSCSRVLVAICQICFD 76
            |.||||    :||. .|.|.|...|.......:|.:|..|||.|..:|..:.::||:.|..:.|.
pombe     4 KPEVDY----SEKFAELQKSLNNLNTIDIDANLEKLLIFEKQVRQASDTSTNTKVLIYIADLLFR 64

  Fly    77 ASNWNALNEYVSLLVRRRSQLKQAVVKMIQECVTYVDKTPDKETKLKLIDTLRSVTEGKIYVEIE 141
            |.::..|||.:..|.::..||||::..::|..:||:....|.:||:.||:|||::|:||||||:|
pombe    65 AGDFQGLNEQLVSLFKKHGQLKQSMTSLVQHVMTYLPGIDDLKTKINLIETLRTITDGKIYVEVE 129

  Fly   142 RARLTKILADIKEADGDVAGAATVMEELQVETYGSMDKREKVELILEQMRLCLLKEDYVSTQIIA 206
            |||||::|:.|||..||:..|..::....||||||.|.:|||..||:|:||.||:.||.......
pombe   130 RARLTQLLSQIKEEQGDIKSAQEILCNEPVETYGSFDLKEKVAFILDQVRLFLLRSDYYMASTYT 194

  Fly   207 KKISIKFFDDPAQHDLKLKFYYLMIQLN-RDTSFLNTSRHYQAIAEPPRKKTGLTPVDSAASTDE 270
            |||::|||:......||||:|...|::. .|.::|:..::|:|:            .|:|.    
pombe   195 KKINVKFFEKEDVQSLKLKYYEQKIRIGLHDDAYLDVCKYYRAV------------YDTAV---- 243

  Fly   271 QKKKDDDKKKKEEDDKDKKPEVATEAEVEIELTEEQKKELTEKLVCAVLYCVLAPFDNEQSDMMA 335
                      .:||                   .|:.||:.|.:||   :.:|.|:||||:|::.
pombe   244 ----------VQED-------------------PEKWKEILENVVC---FALLTPYDNEQADLLH 276

  Fly   336 HLSKNKKLEEVPAYKEILRLFMSKELINFDTFNADFGLVLAENEMFKDSTKHGKKCITELKDRLI 400
            .::.:.||..:|..:::::.|:..||:.:......:|..|..|.:|.::.:.|:|..:||:.|:|
pombe   277 RINADHKLNSLPLLQQLVKCFIVNELMRWPKIAEIYGSALRSNPVFAENDEKGEKRWSELRKRVI 341

  Fly   401 EHNIRIIAMYYSRLHLARMSELLNLPTSRCEEYLSKLANTDTIRVKIDRPAGIIYFTQKKSASDI 465
            |||||::|.||||:|.:|:..||::..|..|::|..|........||||||.:|.|.:.::..:.
pombe   342 EHNIRVVANYYSRIHCSRLGVLLDMSPSETEQFLCDLIAKHHFYAKIDRPAQVISFKKSQNVQEQ 406

  Fly   466 LNNWATDVNQLMSLVNKTCHLINKEECVYSVMCAV 500
            ||.|.:::.:|:..:.|...||.|||.:.|:..||
pombe   407 LNEWGSNITELLGKLEKVRQLIIKEEMMNSIQQAV 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpn5NP_649588.1 RPN5 13..496 CDD:227403 166/484 (34%)
rpn502NP_594776.1 RPN5 1..438 CDD:227403 167/485 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 186 1.000 Domainoid score I766
eggNOG 1 0.900 - - E1_COG5071
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2109
Inparanoid 1 1.050 290 1.000 Inparanoid score I636
OMA 1 1.010 - - QHG54023
OrthoFinder 1 1.000 - - FOG0003700
OrthoInspector 1 1.000 - - otm47217
orthoMCL 1 0.900 - - OOG6_102014
Panther 1 1.100 - - LDO PTHR10855
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2567
TreeFam 1 0.960 - -
1312.830

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