DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kat-60L1 and RPT2a

DIOPT Version :10

Sequence 1:NP_001163523.1 Gene:kat-60L1 / 40715 FlyBaseID:FBgn0037375 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_194633.1 Gene:RPT2a / 829025 AraportID:AT4G29040 Length:443 Species:Arabidopsis thaliana


Alignment Length:457 Identity:136/457 - (29%)
Similarity:198/457 - (43%) Gaps:98/457 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 GSAGNVGLAGAGAP----------TPAASMGTMRLGRPARASAMTAALRKSRSVERLRARKLSTN 310
            |.:|.:...|...|          .|||.        |||........:...:..||.....||.
plant     4 GPSGGLNRQGDRKPDGGDKKEKKFEPAAP--------PARVGRKQRKQKGPEAAARLPTVTPSTK 60

  Fly   311 TQLNL---------------------KHKPVKKNSLDENSNSDDQDAT-------TSLEDNSHA- 346
            .:|.|                     :.||.::.:.::.|..||...|       ..|.|.:|| 
plant    61 CKLRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAI 125

  Fly   347 --QSLATSHNT------------PKCSPKTKAKHFSPLGYEVHLVDTLEKDI-LQRHPCIKWTDV 396
              .|:...:..            |.||.....|..|.:|.....||.:...: :::.|...:.|:
plant   126 VSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADI 190

  Fly   397 AGLNEAKTILQEAVVLPVIMPEFFK--GIRRPWRGVLMVGPPGTGKTMLAKAVATECGTTFFNVS 459
            .||......::|||.||:..||.::  ||:.| :||::.|.||||||:||||||.....||..|.
plant   191 GGLEAQIQEIKEAVELPLTHPELYEDIGIKPP-KGVILYGEPGTGKTLLAKAVANSTSATFLRVV 254

  Fly   460 SSTLTSKYRGESEKLVRLLFEMARFYAPSTIFIDEIDALCASR---GSDSEHEASRRFKAELLIQ 521
            .|.|..||.|:..||||.||.:|...:||.:|||||||:...|   .|..|.|..|.. .|||.|
plant   255 GSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM-LELLNQ 318

  Fly   522 MDGLNASMQEEKVIMVLAATNHPWDIDEAFRR--RFEKRIYIPLPNEGTRSALLKLCLKDVCLSP 584
            :||.: |..:.|||:   |||....:|.|..|  |.:::|..|||:..||..:.::....:.||.
plant   319 LDGFD-SRGDVKVIL---ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSE 379

  Fly   585 SLNTG---IIGDELQGYSGSDISNVCRDASMMAMRRLISGRTPDQIKQIRREEVDQPITLQDFQD 646
            .:|..   :..||   :||:||..:|.:|.::|:|.             ||.:|..|    ||:.
plant   380 DVNLEEFVMTKDE---FSGADIKAICTEAGLLALRE-------------RRMKVTHP----DFKK 424

  Fly   647 AR 648
            |:
plant   425 AK 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat-60L1NP_001163523.1 P-loop containing Nucleoside Triphosphate Hydrolases 395..561 CDD:476819 75/172 (44%)
AAA_lid_3 591..629 CDD:465537 10/37 (27%)
Vps4_C <638..671 CDD:462762 4/11 (36%)
RPT2aNP_194633.1 PTZ00361 7..443 CDD:185575 135/454 (30%)

Return to query results.
Submit another query.