DRSC/TRiP Functional Genomics Resources

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Protein Alignment kat-60L1 and vps4a

DIOPT Version :10

Sequence 1:NP_001163523.1 Gene:kat-60L1 / 40715 FlyBaseID:FBgn0037375 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_001070077.1 Gene:vps4a / 767670 ZFINID:ZDB-GENE-060929-388 Length:440 Species:Danio rerio


Alignment Length:365 Identity:149/365 - (40%)
Similarity:204/365 - (55%) Gaps:65/365 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 RARKLSTNTQLNLKH--KPVKKNSLDENSNSDDQDATTSLEDNSHAQSLATSHNTPKCSPKTKAK 365
            ||.||....:...|.  ||||:...::.|:||.:.      :|...:.|                
Zfish    66 RAEKLKDYLKNKDKQGKKPVKETQSNDKSDSDSEG------ENPEKKKL---------------- 108

  Fly   366 HFSPLGYEVHLVDTLEKDILQRHPCIKWTDVAGLNEAKTILQEAVVLPVIMPEFFKGIRRPWRGV 430
                   :.||:..    |:...|.::|:|||||..||..|:|||:||:..|..|.|.|.||||:
Zfish   109 -------QEHLMGA----IVMEKPNVRWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGI 162

  Fly   431 LMVGPPGTGKTMLAKAVATEC-GTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPSTIFIDE 494
            |:.|||||||:.||||||||. .:|||:||||.|.||:.|||||||:.||::||.:.||.|||||
Zfish   163 LLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFDLARQHKPSIIFIDE 227

  Fly   495 IDALCASRGSDSEHEASRRFKAELLIQMDGLNASMQEEKVIMVLAATNHPWDIDEAFRRRFEKRI 559
            :|:||.|| :::|.||:||.|.|.|:||.|:.   .....|:||.|||.||.:|.|.||||||||
Zfish   228 VDSLCGSR-NENESEAARRIKTEFLVQMQGVG---NNNDGILVLGATNIPWVLDAAIRRRFEKRI 288

  Fly   560 YIPLPNEGTRSALLKLCLKDVCLSPSLNTGI----IGDELQGYSGSDISNVCRDASMMAMRRLIS 620
            |||||.|..|||:.:|.|.:   :|...|..    :..:..||||:|||.:.|||.|..:|::  
Zfish   289 YIPLPEEPARSAMFRLHLGN---TPHSLTEADLRQLARKTDGYSGADISIIVRDALMQPVRKV-- 348

  Fly   621 GRTPDQIKQIRREEVDQPITLQDFQDARLRTKKSVSADDV 660
             ::....|::|...               |:..:|..||:
Zfish   349 -QSATHFKKVRGPS---------------RSNSAVIVDDL 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat-60L1NP_001163523.1 P-loop containing Nucleoside Triphosphate Hydrolases 395..561 CDD:476819 99/166 (60%)
AAA_lid_3 591..629 CDD:465537 12/37 (32%)
Vps4_C <638..671 CDD:462762 4/23 (17%)
vps4aNP_001070077.1 MIT_VPS4 4..79 CDD:239141 4/12 (33%)
RecA-like_VPS4 120..290 CDD:410929 101/173 (58%)
AAA_lid_3 317..358 CDD:465537 13/43 (30%)
Vps4_C 373..>403 CDD:462762 149/365 (41%)

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