DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kat-60L1 and Spast

DIOPT Version :10

Sequence 1:NP_001163523.1 Gene:kat-60L1 / 40715 FlyBaseID:FBgn0037375 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_001156342.1 Gene:Spast / 50850 MGIID:1858896 Length:614 Species:Mus musculus


Alignment Length:654 Identity:190/654 - (29%)
Similarity:277/654 - (42%) Gaps:183/654 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 KKSSEGGHSSTAERHRPVNNLGSNAPGGLGIGGSVPLRSK------------------------- 188
            ||...||.|....|..|...:.:.|.|.....||.|.|:.                         
Mouse     9 KKKGSGGASPAPARPPPPAAVPAPAAGPAPAAGSPPKRNPSSFSSPLVVGFALLRLLACHLGLLF 73

  Fly   189 ----QRLPTQVSAAEVAPQPRASQTAQMPFPSQQQDNRWVSSLRRRDPELQPTLPSINSNANSSS 249
                ||....:.||:     |:|.||..|                    ..|:.|.......:.|
Mouse    74 AWLCQRFSRALMAAK-----RSSGTAPAP--------------------ASPSPPEPGPGGEAES 113

  Fly   250 LSQSHHGSAGNVGLAGAGAPTPAASMGTMRLGRPARASAMTAALR-KSRSVERL----------- 302
            :...|..:...:.:|             :|:....:|.....|:. ..:.:|.|           
Mouse   114 VRVFHKQAFEYISIA-------------LRIDEEEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQ 165

  Fly   303 -----RARKLSTNTQLNL-----------KHKPVKKNSLDENSNSDDQDATTSLE-DNSHAQS-- 348
                 |||:|......||           |.:||.:.|   .|.:|..:.:|:|. .|.|.||  
Mouse   166 GEQYERARRLQAKMMTNLVMAKDRLQLLEKLQPVLQFS---KSQTDVYNESTNLTCRNGHLQSES 227

  Fly   349 ------------------------------LATSHNTPKCS------------------------ 359
                                          |:..|..|.||                        
Mouse   228 GAVPKRKDPLTHASNSLPRSKTVLKSGSAGLSGHHRAPSCSGLSMVSGARPGPGPAATTHKGTPK 292

  Fly   360 ---------PKTKAKHFSPL----GYEVHLVDTLEKDILQRHPCIKWTDVAGLNEAKTILQEAVV 411
                     |.|..:....|    ..:.:|.:.:..:|:.....:|:.|:||...||..|||.|:
Mouse   293 PNRTNKPSTPTTAVRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVI 357

  Fly   412 LPVIMPEFFKGIRRPWRGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVR 476
            ||.:.||.|.|:|.|.||:|:.||||.||||||||||.|...||||:|:::|||||.||.|||||
Mouse   358 LPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVR 422

  Fly   477 LLFEMARFYAPSTIFIDEIDALCASRGSDSEHEASRRFKAELLIQMDGLNASMQEEKVIMVLAAT 541
            .||.:||...||.|||||:|:|...| .:.||:||||.|.|.||:.||:.::..:.  ::|:.||
Mouse   423 ALFAVARELQPSIIFIDEVDSLLCER-REGEHDASRRLKTEFLIEFDGVQSAGDDR--VLVMGAT 484

  Fly   542 NHPWDIDEAFRRRFEKRIYIPLPNEGTRSALLK--LCLKDVCLSPSLNTGI--IGDELQGYSGSD 602
            |.|.::|||..|||.||:|:.||||.||..|||  ||.:.   ||.....:  :.....||||||
Mouse   485 NRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQG---SPLTQKELAQLARMTDGYSGSD 546

  Fly   603 ISNVCRDASMMAMRRLISGRTPDQIKQIRREEVDQPITLQDFQDARLRTKKSVSADDVARFEKWM 667
            ::.:.:||::..:|.|    .|:|:|.:...|: :.|.|.||.::..:.|:|||...:..:.:|.
Mouse   547 LTALAKDAALGPIREL----KPEQVKNMSASEM-RNIRLSDFTESLKKIKRSVSPQTLEAYIRWN 606

  Fly   668 EEYG 671
            :::|
Mouse   607 KDFG 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat-60L1NP_001163523.1 P-loop containing Nucleoside Triphosphate Hydrolases 395..561 CDD:476819 91/165 (55%)
AAA_lid_3 591..629 CDD:465537 12/37 (32%)
Vps4_C <638..671 CDD:462762 9/32 (28%)
SpastNP_001156342.1 Required for interaction with RTN1. /evidence=ECO:0000250|UniProtKB:Q9UBP0 1..298 55/329 (17%)
Required for midbody localization. /evidence=ECO:0000250|UniProtKB:Q9UBP0 1..192 38/220 (17%)
Required for interaction with ATL1. /evidence=ECO:0000250|UniProtKB:Q9UBP0 1..78 13/68 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..48 13/38 (34%)
Required for nuclear localization. /evidence=ECO:0000250|UniProtKB:Q9UBP0 1..48 13/38 (34%)
Nuclear localization signal. /evidence=ECO:0000255|HAMAP-Rule:MF_03021 4..11 1/1 (100%)
Required for interaction with SSNA1 and microtubules. /evidence=ECO:0000250|UniProtKB:Q9UBP0 48..85 2/36 (6%)
Nuclear export signal. /evidence=ECO:0000255|HAMAP-Rule:MF_03021 57..65 0/7 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..112 6/40 (15%)
Sufficient for interaction with CHMP1B. /evidence=ECO:0000250|UniProtKB:Q9UBP0 110..194 14/96 (15%)
Required for interaction with microtubules. /evidence=ECO:0000250|UniProtKB:Q9UBP0 112..198 15/98 (15%)
MIT_spastin 114..193 CDD:239142 13/91 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 220..306 11/85 (13%)
Sufficient for microtubule severing. /evidence=ECO:0000250|UniProtKB:Q9UBP0 226..614 140/396 (35%)
Required for interaction with microtubules and microtubule severing. /evidence=ECO:0000250|UniProtKB:Q9UBP0 268..326 5/57 (9%)
Nuclear localization signal. /evidence=ECO:0000255|HAMAP-Rule:MF_03021 307..310 0/2 (0%)
Required for interaction with microtubules. /evidence=ECO:0000250|UniProtKB:Q9UBP0 308..310 0/1 (0%)
RecA-like_spastin 341..504 CDD:410932 91/165 (55%)
AAA_lid_3 531..585 CDD:465537 18/58 (31%)
Vps4_C <578..610 CDD:462762 9/31 (29%)

Return to query results.
Submit another query.