DRSC/TRiP Functional Genomics Resources

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Protein Alignment kat-60L1 and psmc5

DIOPT Version :10

Sequence 1:NP_001163523.1 Gene:kat-60L1 / 40715 FlyBaseID:FBgn0037375 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_001003740.1 Gene:psmc5 / 445285 ZFINID:ZDB-GENE-030131-6547 Length:406 Species:Danio rerio


Alignment Length:414 Identity:131/414 - (31%)
Similarity:200/414 - (48%) Gaps:88/414 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 KSRSVERLRARKLSTNTQLNL-----------------------------KHKPVKKNSLDENSN 330
            ||:::.||:|::...|.::.|                             |..|..|..:|.:.|
Zfish    38 KSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKN 102

  Fly   331 SDDQDAT----TSLEDNSHAQSLATSHNTPKCSPKTKAKHFSPLGYEVHLVDTLEKDILQRHPCI 391
            .|..|.|    .:|.::|:     |.|       |.......||   |.|:      ::::.|..
Zfish   103 IDINDVTPNCRVALRNDSY-----TLH-------KILPNKVDPL---VSLM------MVEKVPDS 146

  Fly   392 KWTDVAGLNEAKTILQEAVVLPVIMPEFFK--GIRRPWRGVLMVGPPGTGKTMLAKAVATECGTT 454
            .:..:.||::....::|.:.|||..||.|:  ||.:| :|||:.||||||||:||:|||.....|
Zfish   147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQP-KGVLLYGPPGTGKTLLARAVAHHTDCT 210

  Fly   455 FFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPSTIFIDEIDALCASR-----GSDSEHEASRRF 514
            |..||.|.|..|:.||..::||.||.|||.:|||.||:||||::.:||     |.|||   .:|.
Zfish   211 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSE---VQRT 272

  Fly   515 KAELLIQMDGLNASMQEEKVIMVLAATNHPWDIDEAFRR--RFEKRIYIPLPNEGTRSALLKLCL 577
            ..|||.|:||..|:    |.|.|:.|||....:|.|..|  |.:::|..|.|||..|..:||:..
Zfish   273 MLELLNQLDGFEAT----KNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHS 333

  Fly   578 KDVCLSPSLNTGIIGDELQGYSGSDISNVCRDASMMAMRRLISGRTPDQIKQIRREEVDQPITLQ 642
            :.:.|:..:|...|.:.:.|.||:::..||.:|.|.|:|.             ||..|.|    :
Zfish   334 RKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRE-------------RRVHVTQ----E 381

  Fly   643 DFQDARLRTKKSVSADDVARFEKW 666
            ||:.|..:..:..|..:::..:.|
Zfish   382 DFEMAVAKVMQKDSEKNMSIKKLW 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat-60L1NP_001163523.1 P-loop containing Nucleoside Triphosphate Hydrolases 395..561 CDD:476819 78/174 (45%)
AAA_lid_3 591..629 CDD:465537 10/37 (27%)
Vps4_C <638..671 CDD:462762 5/29 (17%)
psmc5NP_001003740.1 PRK03992 24..400 CDD:179699 130/407 (32%)

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