DRSC/TRiP Functional Genomics Resources

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Protein Alignment kat-60L1 and Rpt6R

DIOPT Version :10

Sequence 1:NP_001163523.1 Gene:kat-60L1 / 40715 FlyBaseID:FBgn0037375 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_651811.1 Gene:Rpt6R / 43635 FlyBaseID:FBgn0039788 Length:399 Species:Drosophila melanogaster


Alignment Length:411 Identity:130/411 - (31%)
Similarity:204/411 - (49%) Gaps:83/411 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 KSRSVERLRARKLSTNTQLNLKH-----------------KPVKKNSL-----DENSNSDDQDAT 337
            :.:::.||:|::...|.::.|..                 ||:.||.:     .|.....|.|.|
  Fly    32 RQKNLLRLQAQRNELNLKVRLLREELQLLQEQGSYIAEVVKPMDKNKVLVKVHPEGKYVVDVDKT 96

  Fly   338 TSLEDNSHAQSLATSHNTPKCSPKTKAKHFSPLGYEVHLVDTLEKD------ILQRHPCIKWTDV 396
            .:::|.:.:..:|..:.:                |.:|.:...:.|      ::::.|...:..|
  Fly    97 INIKDVTPSSRVALRNES----------------YTLHKILPNKVDPLVSLMLVEKVPDSTYEMV 145

  Fly   397 AGLNEAKTILQEAVVLPVIMPEFFK--GIRRPWRGVLMVGPPGTGKTMLAKAVA--TECGTTFFN 457
            .||::....::|.:.|||..||.|.  ||.:| :|||:.||||||||:||:|||  |||  ||..
  Fly   146 GGLDKQIQEIKEVIELPVKHPELFDALGITQP-KGVLLYGPPGTGKTLLARAVAHHTEC--TFIR 207

  Fly   458 VSSSTLTSKYRGESEKLVRLLFEMARFYAPSTIFIDEIDALCASR----GSDSEHEASRRFKAEL 518
            ||.|.|..|:.||..::||.||.|||.:|||.||:||||::.::|    ..|||   .:|...||
  Fly   208 VSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGTGDSE---VQRTMLEL 269

  Fly   519 LIQMDGLNASMQEEKVIMVLAATNHPWDIDEAFRR--RFEKRIYIPLPNEGTRSALLKLCLKDVC 581
            |.|:||..|:    |.|.|:.|||....:|:|..|  |.:::|..|.|||..|..:||:..:.:.
  Fly   270 LNQLDGFEAT----KNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMN 330

  Fly   582 LSPSLNTGIIGDELQGYSGSDISNVCRDASMMAMRRLISGRTPDQIKQIRREEVDQPITLQDFQD 646
            |:..:|...|.:|:.|.||:::..||.:|.|.|:|.             ||..|.|    :||:.
  Fly   331 LTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRE-------------RRVHVTQ----EDFEM 378

  Fly   647 A--RLRTKKSVSADDVARFEK 665
            |  ::..|.|.....:.:|.|
  Fly   379 AVSKVMMKDSEKNMSIRKFWK 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat-60L1NP_001163523.1 P-loop containing Nucleoside Triphosphate Hydrolases 395..561 CDD:476819 80/175 (46%)
AAA_lid_3 591..629 CDD:465537 11/37 (30%)
Vps4_C <638..671 CDD:462762 7/30 (23%)
Rpt6RNP_651811.1 PRK03992 21..395 CDD:179699 128/405 (32%)

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