DRSC/TRiP Functional Genomics Resources

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Protein Alignment kat-60L1 and spas

DIOPT Version :10

Sequence 1:NP_001163523.1 Gene:kat-60L1 / 40715 FlyBaseID:FBgn0037375 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_651206.3 Gene:spas / 42846 FlyBaseID:FBgn0039141 Length:758 Species:Drosophila melanogaster


Alignment Length:63 Identity:15/63 - (23%)
Similarity:27/63 - (42%) Gaps:17/63 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 SNESIKNVGVESGATAKRRMMEHQKSIRDGDPEDIP--------IEKDDDDKIVAQEKKQTEI 140
            |||::|.|.:..||        |...:|..:|.| |        :...:..|.:.:.:||.::
  Fly   427 SNENVKIVLIPEGA--------HHLDLRASNPAD-PASVTRARAVHVQNIQKWLTEYRKQRKV 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat-60L1NP_001163523.1 P-loop containing Nucleoside Triphosphate Hydrolases 395..561 CDD:476819
AAA_lid_3 591..629 CDD:465537
Vps4_C <638..671 CDD:462762
spasNP_651206.3 MIT_spastin 230..308 CDD:239142
RecA-like_spastin 484..648 CDD:410932
AAA_lid_3 676..727 CDD:465537
Vps4_C <722..754 CDD:462762
Blue background indicates that the domain is not in the aligned region.

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