DRSC/TRiP Functional Genomics Resources

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Protein Alignment kat-60L1 and Rpt2

DIOPT Version :10

Sequence 1:NP_001163523.1 Gene:kat-60L1 / 40715 FlyBaseID:FBgn0037375 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_524469.2 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster


Alignment Length:464 Identity:143/464 - (30%)
Similarity:213/464 - (45%) Gaps:101/464 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 SQSHHGSAG------------------NVGLAGAGAPTPAASMGTMRLGRPARASAMTAALRKSR 297
            :||..|.||                  .||.....|..|.|:|...::....|.......|.:.:
  Fly     4 NQSAQGGAGEKKDDKDKKKKYEPPIPTRVGKKKRRAKGPDAAMKLPQVTPHTRCRLKLLKLERIK 68

  Fly   298 SVERLRARKLSTNTQLNLKHKPVKKNSLDENSNSDDQDATT----SLE---DNSHA---QSLATS 352
            ....:....:....:|    ||..:.:.:|.|..||...|.    :||   |::||   .|:.:.
  Fly    69 DYLMMEDEFIRNQERL----KPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSE 129

  Fly   353 HNT------------PKCSPKTKAKHFSPLGYEVH-LVDTLEKDI--------LQRHPCIKWTDV 396
            |..            |.||..        |.::|| :|..|..|.        |::.|...:.|:
  Fly   130 HYVSILSFVDKDQLEPGCSVL--------LNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADI 186

  Fly   397 AGLNEAKTILQEAVVLPVIMPEFFK--GIRRPWRGVLMVGPPGTGKTMLAKAVATECGTTFFNVS 459
            .||:.....::|:|.||:..||:::  ||:.| :||::.||||||||:||||||.:...||..|.
  Fly   187 GGLDTQIQEIKESVELPLTHPEYYEEMGIKPP-KGVILYGPPGTGKTLLAKAVANQTSATFLRVV 250

  Fly   460 SSTLTSKYRGESEKLVRLLFEMARFYAPSTIFIDEIDALCASR---GSDSEHEASRRFKAELLIQ 521
            .|.|..||.|:..||||.||.:|..:|||.:|||||||:...|   .|..|.|..|.. .|||.|
  Fly   251 GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTM-LELLNQ 314

  Fly   522 MDGLNASMQEEKVIMVLAATNHPWDIDEAFRR--RFEKRIYIPLPNEGTRSALLKLCLKDVCLSP 584
            :||.: |..:.||||   |||....:|.|..|  |.:::|..|||:|.|:..:..:....:.|:.
  Fly   315 LDGFD-SRGDVKVIM---ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAE 375

  Fly   585 SLNTG---IIGDELQGYSGSDISNVCRDASMMAMRRLISGRTPDQIKQIRREEVDQPITLQDFQD 646
            .:|..   :..|:|   ||:||..:|.:|.:||:|.             ||.:|    |.:||: 
  Fly   376 DVNLSELIMAKDDL---SGADIKAICTEAGLMALRE-------------RRMKV----TNEDFK- 419

  Fly   647 ARLRTKKSV 655
               ::|:||
  Fly   420 ---KSKESV 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat-60L1NP_001163523.1 P-loop containing Nucleoside Triphosphate Hydrolases 395..561 CDD:476819 77/172 (45%)
AAA_lid_3 591..629 CDD:465537 11/37 (30%)
Vps4_C <638..671 CDD:462762 6/18 (33%)
Rpt2NP_524469.2 PTZ00361 1..439 CDD:185575 143/464 (31%)

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