DRSC/TRiP Functional Genomics Resources

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Protein Alignment kat-60L1 and psmc1b

DIOPT Version :10

Sequence 1:NP_001163523.1 Gene:kat-60L1 / 40715 FlyBaseID:FBgn0037375 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_001002091.1 Gene:psmc1b / 415181 ZFINID:ZDB-GENE-040625-69 Length:440 Species:Danio rerio


Alignment Length:480 Identity:145/480 - (30%)
Similarity:216/480 - (45%) Gaps:128/480 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 LSQSHHGSAGNVGLAGAG------------APTPAASMGTMRLGRPARASAMTAALRKSRSVERL 302
            :.||..|..|    .|.|            .|.|.      |:|:           ||.:|....
Zfish     1 MGQSQSGGHG----PGGGKKDDKDKKKKYEPPIPT------RVGK-----------RKRKSKGPD 44

  Fly   303 RARKL---STNTQLNLK-----------------------HKPVKKNSLDENSNSDDQDATT--- 338
            .|.||   :.:||..||                       .||:::...:|.|..||...|.   
Zfish    45 AASKLPLVTPHTQCRLKLLKQDRIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSV 109

  Fly   339 -SLE---DNSHA---QSLATSHNT------------PKCSPKTKAKHFSPLGYEVHLVDTLEKDI 384
             :||   |::||   .|:.:.|..            |.||.....|..:.:|..:...|.|...:
Zfish   110 GTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVM 174

  Fly   385 -LQRHPCIKWTDVAGLNEAKTILQEAVVLPVIMPEFFK--GIRRPWRGVLMVGPPGTGKTMLAKA 446
             :::.|...:.|:.||:.....::|:|.||:..||:::  ||:.| :||::.|.||||||:||||
Zfish   175 KVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPP-KGVILYGAPGTGKTLLAKA 238

  Fly   447 VATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPSTIFIDEIDALCASR---GSDSEH 508
            ||.:...||..|..|.|..||.|:..||||.||.:|..:|||.:|||||||:...|   .|..|.
Zfish   239 VANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303

  Fly   509 EASRRFKAELLIQMDGLNASMQEEKVIMVLAATNHPWDIDEAFRR--RFEKRIYIPLPNEGTRSA 571
            |..|.. .|||.|:||.: |..:.||||   |||....:|.|..|  |.:::|..|||:|.|:..
Zfish   304 EIQRTM-LELLNQLDGFD-SRGDVKVIM---ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 363

  Fly   572 LLKL------CLKDVCLSPSLNTGIIGDELQGYSGSDISNVCRDASMMAMRRLISGRTPDQIKQI 630
            :.::      ..:||.|...:   :..|:|   ||:||..:|.:|.:||:|.             
Zfish   364 IFQIHTSRMTVAEDVSLDDLI---LAKDDL---SGADIKAICTEAGLMALRE------------- 409

  Fly   631 RREEVDQPITLQDFQDARLRTKKSV 655
            ||.:|    |.:||:    ::|::|
Zfish   410 RRMKV----TNEDFK----KSKENV 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat-60L1NP_001163523.1 P-loop containing Nucleoside Triphosphate Hydrolases 395..561 CDD:476819 76/172 (44%)
AAA_lid_3 591..629 CDD:465537 11/37 (30%)
Vps4_C <638..671 CDD:462762 5/18 (28%)
psmc1bNP_001002091.1 PTZ00361 1..440 CDD:185575 145/480 (30%)

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