DRSC/TRiP Functional Genomics Resources

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Protein Alignment kat-60L1 and vps4b

DIOPT Version :10

Sequence 1:NP_001163523.1 Gene:kat-60L1 / 40715 FlyBaseID:FBgn0037375 Length:673 Species:Drosophila melanogaster
Sequence 2:XP_073770081.1 Gene:vps4b / 393880 ZFINID:ZDB-GENE-040426-1235 Length:562 Species:Danio rerio


Alignment Length:417 Identity:161/417 - (38%)
Similarity:226/417 - (54%) Gaps:80/417 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 KSRSVERL-RARKLSTNTQLNLK--HKPVKKNSLDENSNSDDQDATTSLEDNSHAQSLATSHNTP 356
            :::..|.| ||.||....:...|  .||||::..::..|..|.:     ||              
Zfish   183 RAKCAEYLDRAEKLKEYLKKKEKAPAKPVKESQSNDKGNESDGE-----ED-------------- 228

  Fly   357 KCSPKTKAKHFSPLGYEVHLVDTLEKDILQRHPCIKWTDVAGLNEAKTILQEAVVLPVIMPEFFK 421
               |:.|           ...:.|...|:...|.|||.|||||..||..|:|||:||:..|..|.
Zfish   229 ---PEKK-----------KFQNQLSGAIVMEKPNIKWNDVAGLEGAKEALKEAVILPIKFPHLFT 279

  Fly   422 GIRRPWRGVLMVGPPGTGKTMLAKAVATEC-GTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFY 485
            |.|.||||:|:.|||||||:.||||||||. .:|||::|||.|.||:.|||||||:.||.:||.:
Zfish   280 GKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKSLFTLAREH 344

  Fly   486 APSTIFIDEIDALCASRGSDSEHEASRRFKAELLIQMDGLNASMQEEKVIMVLAATNHPWDIDEA 550
            .||.|||||||:||.|| |::|.||:||.|.|.|:||.|:.   .:.:.|:||.|||.||.:|.|
Zfish   345 KPSIIFIDEIDSLCGSR-SENESEAARRIKTEFLVQMQGVG---NDNEGILVLGATNIPWTLDSA 405

  Fly   551 FRRRFEKRIYIPLPNEGTRSALLKLCLKDVCLSPSLNTG----IIGDELQGYSGSDISNVCRDAS 611
            .|||||||||||||.|..||.:.||   ::..:|:..|.    .:|.:..||||:|||.:.|||.
Zfish   406 IRRRFEKRIYIPLPEEHARSFMFKL---NLGTTPNSLTESDFMTLGKKTDGYSGADISIIVRDAL 467

  Fly   612 MMAMRRLISGRTPDQIK-------------------------------QIRREEVDQPI-TLQDF 644
            |..:|::.|.....|::                               ::..|::.:|| ::.|.
Zfish   468 MQPVRKVQSATHFKQVRGPSRSDPNVIVDDLLTPCSPGDPQAKEMTWMEVPGEKLLEPIVSMSDM 532

  Fly   645 QDARLRTKKSVSADDVARFEKWMEEYG 671
            ..:...||.:|:..|:.:.:|:.|::|
Zfish   533 LRSLSNTKPTVNEQDLEKLKKFTEDFG 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat-60L1NP_001163523.1 P-loop containing Nucleoside Triphosphate Hydrolases 395..561 CDD:476819 100/166 (60%)
AAA_lid_3 591..629 CDD:465537 15/68 (22%)
Vps4_C <638..671 CDD:462762 9/33 (27%)
vps4bXP_073770081.1 None

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