DRSC/TRiP Functional Genomics Resources

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Protein Alignment kat-60L1 and atad1b

DIOPT Version :10

Sequence 1:NP_001163523.1 Gene:kat-60L1 / 40715 FlyBaseID:FBgn0037375 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_001019592.1 Gene:atad1b / 368412 ZFINID:ZDB-GENE-030616-44 Length:362 Species:Danio rerio


Alignment Length:292 Identity:116/292 - (39%)
Similarity:166/292 - (56%) Gaps:23/292 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   372 YEV----HLVDTLEKDILQRHPCIKWTDVAGLNEAKTILQEAVVLPVIMPEFFKGIR--RPWRGV 430
            ||:    ||||.|...       |.|.|:|||:|..|.|::.|:||:.....|:|.|  :|.:||
Zfish    76 YEMSIAAHLVDPLTMQ-------ITWYDIAGLDEVITELKDTVILPIQKRHLFEGSRLLQPPKGV 133

  Fly   431 LMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPSTIFIDEI 495
            |:.||||.|||::|||.|.|.|..|.|:..||||.|:.|||:||...:|.:|....||.||||||
Zfish   134 LLYGPPGCGKTLIAKATAKEAGFRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEI 198

  Fly   496 DALCASRGSDSEHEASRRFKAELLIQMDGLNASMQEEKVIMVLAATNHPWDIDEAFRRRFEKRIY 560
            |:...:| |.|:|||:...||:.:...|||:.....:.:||  .|||.|.|:|.|..||...|.:
Zfish   199 DSFLRNR-SSSDHEATAMMKAQFMSLWDGLDTDYNCQVIIM--GATNRPQDLDSAILRRMPTRFH 260

  Fly   561 IPLPNEGTRSALLKLCLKDVCLSPSLNTGIIGDELQGYSGSDISNVCRDASMMAMRRLISGRTPD 625
            |..||...|..:|||.|::..:..::....|..:..|:||||:..:||||:::.:|..:...:|:
Zfish   261 INQPNARQRKDILKLILENENVESAVELSEIAKQTDGFSGSDLREMCRDAALLCVRDFVHQESPE 325

  Fly   626 QIKQIRREEVDQPITLQDFQDARLRTKKSVSA 657
                   |:..:||..:|.|.|..:.|||.||
Zfish   326 -------EDFIRPIRQEDLQRAIEKMKKSKSA 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat-60L1NP_001163523.1 P-loop containing Nucleoside Triphosphate Hydrolases 395..561 CDD:476819 76/167 (46%)
AAA_lid_3 591..629 CDD:465537 12/37 (32%)
Vps4_C <638..671 CDD:462762 10/20 (50%)
atad1bNP_001019592.1 SpoVK 3..339 CDD:440232 109/279 (39%)
RecA-like_ATAD1 96..261 CDD:410928 76/167 (46%)

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