DRSC/TRiP Functional Genomics Resources

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Protein Alignment kat-60L1 and Atad1

DIOPT Version :10

Sequence 1:NP_001163523.1 Gene:kat-60L1 / 40715 FlyBaseID:FBgn0037375 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_001030174.1 Gene:Atad1 / 309532 RGDID:1308570 Length:361 Species:Rattus norvegicus


Alignment Length:324 Identity:116/324 - (35%)
Similarity:175/324 - (54%) Gaps:24/324 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 DNSHAQSLATSHNTPKCSPKTKAKHFSPLGYEV----HLVDTLEKDILQRHPCIKWTDVAGLNEA 402
            |.:..|.:.......|...:...|:.....||:    ||||.|...       :.|:|:|||::.
  Rat    42 DPTRKQKVEAQKQAEKLMKQIGVKNVKLSEYEMSIAAHLVDPLNMH-------VTWSDIAGLDDV 99

  Fly   403 KTILQEAVVLPVIMPEFFKGIR--RPWRGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTS 465
            .|.|::.|:||:.....|:..|  :|.:|||:.||||.|||::|||.|.|.|..|.|:..||||.
  Rat   100 ITDLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTD 164

  Fly   466 KYRGESEKLVRLLFEMARFYAPSTIFIDEIDALCASRGSDSEHEASRRFKAELLIQMDGLNA--S 528
            |:.|||:||...:|.:|....||.|||||||:...:| |.|:|||:...||:.:...|||:.  |
  Rat   165 KWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNR-SSSDHEATAMMKAQFMSLWDGLDTDHS 228

  Fly   529 MQEEKVIMVLAATNHPWDIDEAFRRRFEKRIYIPLPNEGTRSALLKLCLKDVCLSPSLNTGIIGD 593
            .|    ::|:.|||.|.|:|.|..||...|.:|..|....|.|:|||.||:..:...::...:..
  Rat   229 CQ----VIVMGATNRPQDLDSAIMRRMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQ 289

  Fly   594 ELQGYSGSDISNVCRDASMMAMRRLISGRTPDQIKQIRREEVDQPITLQDFQDARLRTKKSVSA 657
            |..|:||||:..:||||:::.:|..::..:    ::...|:..:|:..||...|..:.|||..|
  Rat   290 ETDGFSGSDLKEMCRDAALLCVREYVNSTS----EESHDEDEIRPVQQQDLHRAIEKMKKSKDA 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat-60L1NP_001163523.1 P-loop containing Nucleoside Triphosphate Hydrolases 395..561 CDD:476819 75/169 (44%)
AAA_lid_3 591..629 CDD:465537 11/37 (30%)
Vps4_C <638..671 CDD:462762 8/20 (40%)
Atad1NP_001030174.1 SpoVK 4..344 CDD:440232 112/317 (35%)
RecA-like_ATAD1 92..257 CDD:410928 75/169 (44%)

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