DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kat-60L1 and VPS4A

DIOPT Version :10

Sequence 1:NP_001163523.1 Gene:kat-60L1 / 40715 FlyBaseID:FBgn0037375 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_037377.1 Gene:VPS4A / 27183 HGNCID:13488 Length:437 Species:Homo sapiens


Alignment Length:417 Identity:157/417 - (37%)
Similarity:222/417 - (53%) Gaps:79/417 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 KSRSVERL-RARKLSTNTQLNLKH--KPVKKNSLDENSNSDDQDATTSLEDNSHAQSLATSHNTP 356
            :::.|:.| ||.||....:...||  ||||:|..:...:..|.:.     ||             
Human    57 RAKCVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEG-----DN------------- 103

  Fly   357 KCSPKTKAKHFSPLGYEVHLVDTLEKDILQRHPCIKWTDVAGLNEAKTILQEAVVLPVIMPEFFK 421
               |:.|           .|.:.|...::...|.|:|.|||||..||..|:|||:||:..|..|.
Human   104 ---PEKK-----------KLQEQLMGAVVMEKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFT 154

  Fly   422 GIRRPWRGVLMVGPPGTGKTMLAKAVATEC-GTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFY 485
            |.|.||||:|:.|||||||:.||||||||. .:|||:||||.|.||:.|||||||:.|||:||.:
Human   155 GKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQH 219

  Fly   486 APSTIFIDEIDALCASRGSDSEHEASRRFKAELLIQMDGLNASMQEEKVIMVLAATNHPWDIDEA 550
            .||.|||||:|:||.|| :::|.||:||.|.|.|:||.|:.   ......:||.|||.||.:|.|
Human   220 KPSIIFIDEVDSLCGSR-NENESEAARRIKTEFLVQMQGVG---NNNDGTLVLGATNIPWVLDSA 280

  Fly   551 FRRRFEKRIYIPLPNEGTRSALLKLCLKDVCLSP----SLNTGIIGDELQGYSGSDISNVCRDAS 611
            .|||||||||||||.|..|:.:.:|.|..   :|    ..|...:..:.:||||:|||.:.||:.
Human   281 IRRRFEKRIYIPLPEEAARAQMFRLHLGS---TPHNLTDANIHELARKTEGYSGADISIIVRDSL 342

  Fly   612 MMAMRR------------------------LISGRTPDQIKQIRREEVDQP--------ITLQDF 644
            |..:|:                        |::..:|.....:....:|.|        :.:.|.
Human   343 MQPVRKVQSATHFKKVCGPSRTNPSMMIDDLLTPCSPGDPGAMEMTWMDVPGDKLLEPVVCMSDM 407

  Fly   645 QDARLRTKKSVSADDVARFEKWMEEYG 671
            ..:...|:.:|:|||:.:.:|:.|::|
Human   408 LRSLATTRPTVNADDLLKVKKFSEDFG 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat-60L1NP_001163523.1 P-loop containing Nucleoside Triphosphate Hydrolases 395..561 CDD:476819 99/166 (60%)
AAA_lid_3 591..629 CDD:465537 13/61 (21%)
Vps4_C <638..671 CDD:462762 9/40 (23%)
VPS4ANP_037377.1 Interaction with CHMP1B 1..84 8/26 (31%)
PTZ00454 4..348 CDD:240423 143/329 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..106 11/51 (22%)
RecA-like_VPS4 121..291 CDD:410929 102/173 (59%)
Vps4_C 374..434 CDD:462762 11/59 (19%)

Return to query results.
Submit another query.