DRSC/TRiP Functional Genomics Resources

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Protein Alignment kat-60L1 and Psmc2

DIOPT Version :10

Sequence 1:NP_001163523.1 Gene:kat-60L1 / 40715 FlyBaseID:FBgn0037375 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_035318.2 Gene:Psmc2 / 19181 MGIID:109555 Length:433 Species:Mus musculus


Alignment Length:441 Identity:120/441 - (27%)
Similarity:195/441 - (44%) Gaps:79/441 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 LRRRDPELQPTLPSINSNANSSSLSQSHHGSAGNVGLAGAGAPTPAASMGTMRLGRPARASAMTA 291
            :::.:.::|..|..||   ..:.:.:|      :.|||.......||...|::..:|.:.:..|.
Mouse    45 IKQVEDDIQQLLKKIN---ELTGIKES------DTGLAPPALWDLAADKQTLQSEQPLQVARCTK 100

  Fly   292 ALRKSRSVERLRARKLSTNTQLNLKHKPVKKNSLDENSNSDDQDATTSLEDNSHAQSLATSHNTP 356
            .:...           |.:.:..:..|...|..:|    ..||.|.|.:|:   ...:....|. 
Mouse   101 IINAD-----------SEDPKYIINVKQFAKFVVD----LSDQVAPTDIEE---GMRVGVDRNK- 146

  Fly   357 KCSPKTKAKHFSPLGYEVHL-----VD-TLEKDILQRHPCIKWTDVAGLNEAKTILQEAVVLPVI 415
                           |::|:     :| |:....::..|.:.::||.|..|....|:|.|..|::
Mouse   147 ---------------YQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLL 196

  Fly   416 MPEFF--KGIRRPWRGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLL 478
            .||.|  .||..| :|||:.||||||||:.|:|||......|..|..|.|..||.||..::||.|
Mouse   197 HPERFVNLGIEPP-KGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVREL 260

  Fly   479 FEMARFYAPSTIFIDEIDALCASR---GSDSEHEASRRFKAELLIQMDGLNASMQEEKVIMVLAA 540
            |||||......||.|||||:..:|   |:..::|..|.. .||:.|:||.:....    |.||.|
Mouse   261 FEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTM-LELINQLDGFDPRGN----IKVLMA 320

  Fly   541 TNHPWDIDEAFRR--RFEKRIYIPLPNEGTRSALLKLCLKDVCLSPSLNTGIIGDELQGYSGSDI 603
            ||.|..:|.|..|  |.:::|...||:...|:.:.|:..:.:.:...:...::.......:|::|
Mouse   321 TNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEI 385

  Fly   604 SNVCRDASMMAMRRLISGRTPDQIKQIRREEVDQPITLQDFQDARLRTKKS 654
            .:||.:|.|.|:|              .|.::   .|.:||.:|..:..||
Mouse   386 RSVCTEAGMFAIR--------------ARRKI---ATEKDFLEAVNKVIKS 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat-60L1NP_001163523.1 P-loop containing Nucleoside Triphosphate Hydrolases 395..561 CDD:476819 73/172 (42%)
AAA_lid_3 591..629 CDD:465537 8/37 (22%)
Vps4_C <638..671 CDD:462762 6/17 (35%)
Psmc2NP_035318.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
PRK03992 44..430 CDD:179699 120/441 (27%)
Blue background indicates that the domain is not in the aligned region.

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