DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kat-60L1 and spas-1

DIOPT Version :10

Sequence 1:NP_001163523.1 Gene:kat-60L1 / 40715 FlyBaseID:FBgn0037375 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_001256115.1 Gene:spas-1 / 179300 WormBaseID:WBGene00016045 Length:512 Species:Caenorhabditis elegans


Alignment Length:529 Identity:170/529 - (32%)
Similarity:262/529 - (49%) Gaps:97/529 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 GSVPLRSKQRLPTQVSAAEVAPQPR-----ASQTAQMPFP----SQQQDNRWVSSLRRRDPELQP 236
            ||:    :::|.|    ||:..:.|     |::...|..|    |:.:|.|  .::.:.:...|.
 Worm    42 GSI----QEKLRT----AELYKEARSLLKEANEFNIMDIPETRRSEIRDKR--QNMMKLEKSAQD 96

  Fly   237 TLPSINSNANSSSLSQSHHGSAGNVGLAGAGAPTPAASMGTMRLGRPARASA---MTAALRKSRS 298
            .|.:| .|....::.||...:.|....|.|...||          ||.||:|   ..||..|...
 Worm    97 RLIAI-CNEVDPNVKQSRSATVGPSRPASAARVTP----------RPTRATAPEKKNAAKAKEND 150

  Fly   299 VERLRARKLSTNTQLNLKHKPVKKNSLDENSNSDDQDATTSLEDNSHAQSLATSHN----TPKCS 359
            ..|   ...|...:....|:||.|.|                 |..|.:....:.|    |.|..
 Worm   151 ENR---HVCSRGDRCGAHHQPVTKKS-----------------DTVHPEPPVQASNRKMETVKRV 195

  Fly   360 PKTKAK---HFSPLGYEVHLVDTLEKDILQR-------HPCIKWTDVAGLNEAKTILQEAVVLPV 414
            ...||.   |.:|:. ...|::.::|.|.:|       :..::..||||.:.||..|:|||:||.
 Worm   196 KVDKASLPMHQNPVN-RAALLNGVDKVIGERLLDEVLDNTGVRMDDVAGCHSAKAALEEAVILPA 259

  Fly   415 IMPEFFKGIRRPWRGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLF 479
            :.|..|||:|:|.:|:|:.||||.|||:||||||.|....|||:|:|:||||:.|:|||.:|.||
 Worm   260 LNPNLFKGLRQPVKGILLFGPPGNGKTLLAKAVAGESKQMFFNISASSLTSKWVGDSEKTIRGLF 324

  Fly   480 EMARFYAPSTIFIDEIDALCASRGSDSEHEASRRFKAELLIQMDGLNASMQEEKVIMVLAATNHP 544
            ::||...||.|||||||::...| |:.:.|.|||.|.|.|:|.||..:|..:.  |:|:.|||.|
 Worm   325 QIARNAQPSIIFIDEIDSILCER-SEKDAEVSRRMKTEFLVQFDGATSSADDR--ILVIGATNRP 386

  Fly   545 WDIDEAFRRRFEKRIYIPLPNEGTRSALLKLCLKDVCLSPSLNTGIIGDELQ-------GYSGSD 602
            .::|:|..|||.|||.:.||:|..|..|:...||    ..::..|:|..:::       |:|.||
 Worm   387 HELDDAVLRRFPKRIMLNLPDEEARKELITKTLK----KHNMMDGLISSDIRYIASNTSGFSNSD 447

  Fly   603 ISNVCRDASMMAMRRL----ISGRTPDQIKQIRREEVDQPITLQDFQDARLRT-KKSVSADDVAR 662
            :..:|::|:|:.:|.:    :|....::|::||         ..|| |..||| :.|.|...:::
 Worm   448 LVALCKEAAMVPIREIDRSKLSMTDGEKIRKIR---------ASDF-DTALRTIRPSTSQKIMSK 502

  Fly   663 FEKWMEEYG 671
            ...:...:|
 Worm   503 LSDFSRSFG 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat-60L1NP_001163523.1 P-loop containing Nucleoside Triphosphate Hydrolases 395..561 CDD:476819 88/165 (53%)
AAA_lid_3 591..629 CDD:465537 11/48 (23%)
Vps4_C <638..671 CDD:462762 8/33 (24%)
spas-1NP_001256115.1 cell_div_CdvC 175..510 CDD:468935 129/352 (37%)
P-loop containing Nucleoside Triphosphate Hydrolases 240..401 CDD:476819 86/163 (53%)

Return to query results.
Submit another query.