DRSC/TRiP Functional Genomics Resources

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Protein Alignment kat-60L1 and Gk2

DIOPT Version :10

Sequence 1:NP_001163523.1 Gene:kat-60L1 / 40715 FlyBaseID:FBgn0037375 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_034424.1 Gene:Gk2 / 14626 MGIID:1329027 Length:554 Species:Mus musculus


Alignment Length:187 Identity:37/187 - (19%)
Similarity:65/187 - (34%) Gaps:66/187 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 FVPTYR--HTPYHSLWDLHQ----CSSTPPTSLSHMA------------RMMDSLILDSLSPFGF 133
            |||.:.  :.||   |:...    |..|..|:..|:|            .::|::..|...|...
Mouse   360 FVPAFSGLYAPY---WEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLSH 421

  Fly   134 TKITATSRPSRNASLKKSSEGGHSSTAER----------HRPV--------NNLGSNAPGGLGIG 180
            .::                :||  .|..|          |.||        ..||:....|...|
Mouse   422 LQV----------------DGG--MTNNRILMQLQADILHIPVVKSVMPETTALGAAMAAGAAEG 468

  Fly   181 GSVPLRSKQRLPTQVSAAEVAPQPRASQTAQMPFPSQQ----QDNRWVSSLRRRDPE 233
            .:|.....:.|.| :......||.:|:: :::.|.:.:    :...||::   :|||
Mouse   469 VNVWSLEPEDLST-ILMERYEPQIQATE-SEIRFSTWKRAVMKSMGWVTA---KDPE 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat-60L1NP_001163523.1 P-loop containing Nucleoside Triphosphate Hydrolases 395..561 CDD:476819
AAA_lid_3 591..629 CDD:465537
Vps4_C <638..671 CDD:462762
Gk2NP_034424.1 ASKHA_NBD_FGGY_GK1-3-like 11..510 CDD:466802 32/172 (19%)
Blue background indicates that the domain is not in the aligned region.

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