DRSC/TRiP Functional Genomics Resources

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Protein Alignment jagn and Jagn1

DIOPT Version :10

Sequence 1:NP_649585.1 Gene:jagn / 40714 FlyBaseID:FBgn0037374 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_001037737.1 Gene:Jagn1 / 502872 RGDID:1565488 Length:183 Species:Rattus norvegicus


Alignment Length:195 Identity:59/195 - (30%)
Similarity:101/195 - (51%) Gaps:14/195 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MATRGGPMVAGTDGNDFEFRQRVAGTYQISLLNKSRLKYCIFFHALLFFVMLAKLTSDILDHLDI 65
            ||:|.||..|||||:||:.|:|||..||:|:..|..:|..|:.|.:::.:::||::   :.||.:
  Rat     1 MASRAGPRAAGTDGSDFQHRERVAMHYQMSVTLKYEIKKLIYVHLVIWLLLVAKMS---VGHLRL 62

  Fly    66 FVLEIEELEVPPPLWWEYVWAASLLTSFLGLSAARGNKVREMQKYMVAILLFAILPLFYCFAYYF 130
                :...:|..|..|||.:..|::.|.|||.:...|.:..:...|:::.||:|.||.|.....|
  Rat    63 ----LSHDQVAMPYQWEYPYLLSIVPSVLGLLSFPRNNISYLVLSMISMGLFSIAPLIYGSMEMF 123

  Fly   131 SDVWEFATLDKSVELDETDIFVWRGYPYGVFWYAFCFVGFQVHGFTLYFAYNLVKAWKARTATRK 195
            ....:.....|:..      |:: |:......|....:..|||.:.||::..|:.:|...|..:|
  Rat   124 PAAQQLYRHGKAYR------FLF-GFSAVSVMYLVLVLAVQVHAWQLYYSKKLLDSWFTSTQEKK 181

  Fly   196  195
              Rat   182  181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jagnNP_649585.1 Jagunal 1..191 CDD:462086 57/189 (30%)
Jagn1NP_001037737.1 Jagunal 1..177 CDD:462086 57/189 (30%)

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