DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2082 and Ndrg4

DIOPT Version :10

Sequence 1:NP_001163513.1 Gene:CG2082 / 40713 FlyBaseID:FBgn0027608 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_001258020.1 Gene:Ndrg4 / 64457 RGDID:621593 Length:404 Species:Rattus norvegicus


Alignment Length:328 Identity:89/328 - (27%)
Similarity:150/328 - (45%) Gaps:43/328 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GDLTVIVQGDLSQQEKRAVFITVHDLGCNHN-SFQEFVSSPCMTEIKERSCFIHVDVPGHADNAE 97
            |.|.|:::|  |.:..|...:|.||:|.||. .|....:...|.||.:.....|||.||....|.
  Rat    68 GLLHVVIRG--SPKGNRPAILTYHDVGLNHKLCFNTLFNLEDMQEITKHFVVCHVDAPGQQVGAS 130

  Fly    98 ALADGFPFPSLQSLGEDLVTVLDYLHVKYVIGLGEGAGANVLARFGLAHPSRVLGLILINATGSA 162
            ....|:.|||::.|...|.:|:.:...|||||:|.||||.|||:|.|..|..|.||:|:|...:.
  Rat   131 QFPQGYQFPSMEQLATMLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLMNIDPNG 195

  Fly   163 ASVVQSFKNKFISW---KSDEVAQSAESFLMYHKFGHVMEQIVGENPDKEKIVAEYQKRLHRSLN 224
            ..        :|.|   |...:..:....::.|.|.  .|::|    :..::|..|::::...:|
  Rat   196 KG--------WIDWAATKLSGLTSTLPDTVLSHLFS--QEELV----NNTELVQSYRQQISSVVN 246

  Fly   225 SKNIGLYVKAFMNRKDLTL---------KGCKVDVILITGMLSPYASMVEKLHRDVEKERVTILK 280
            ..|:.|:...:.:|:||.:         |..:..|:|:.|..:|....|.:.:..::....|.||
  Rat   247 QANLQLFWNMYNSRRDLDINRPGTVPNAKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLK 311

  Fly   281 IERAGDV-LADAPGKVAQSILLFCKGQGLLT-------------SVVMPGVDRGRAFSTASSGSL 331
            :..:|.: ....|||:.::...|.:|.|.:.             |..|..:.|.|..|..|:.|:
  Rat   312 MADSGGLPQVTQPGKLTEAFKYFLQGMGYIAHLKDRRLSGGAVPSASMTRLARSRTASLTSASSV 376

  Fly   332 EGA 334
            :|:
  Rat   377 DGS 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2082NP_001163513.1 alpha/beta hydrolases 26..310 CDD:473884 81/289 (28%)
Ndrg4NP_001258020.1 Ndr 60..342 CDD:397285 81/289 (28%)

Return to query results.
Submit another query.