DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Madm and WNK4

DIOPT Version :9

Sequence 1:NP_001303420.1 Gene:Madm / 40710 FlyBaseID:FBgn0027497 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_200643.1 Gene:WNK4 / 835947 AraportID:AT5G58350 Length:571 Species:Arabidopsis thaliana


Alignment Length:590 Identity:132/590 - (22%)
Similarity:219/590 - (37%) Gaps:183/590 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 SEILEESPCGRWLKRREEVDQRDVPGIDCVHLAMDTEEGVEVVWNEVQYASLQELKSQEEKMRQV 158
            :|.:|..|.||: .|..|:..|.  .:..|:.|:|.:.|:||.|::|:   |:|:......::::
plant     7 AEYVETDPTGRY-GRFAEILGRG--AMKTVYKAIDEKLGIEVAWSQVK---LKEVLRSSVDLQRL 65

  Fly   159 FDN---LLQLDHQNIVKFHRYWTDTQQAERPRVVFITEYMSSGSLKQFLKRTKRNAKRLPLESWR 220
            :..   |..|:|::|::|:..|.|   .....:.||||..:||:|:|:    |....|:.:.:.:
plant    66 YSEVHLLSTLNHKSIIRFYTSWID---VHNHTLNFITELFTSGTLRQY----KNKYLRIDIRAIK 123

  Fly   221 RWCTQILSALSYLHSCSPPIIHGNLTCDSIFIQ-HNGLVKIGSVVPDAVHYSVRRGRERERERER 284
            .|..|||..|.|||...||:||.:|.||:||:. |.|.||||.:           |..|......
plant   124 SWARQILEGLVYLHEHDPPVIHRDLKCDNIFVNGHLGQVKIGDL-----------GLARMLRDCH 177

  Fly   285 GAH------YFQAPEYGAADQLTAALDIYAFGMCALEMAALEIQPSNSESTA-INEETIQRTI-- 340
            .||      .|.|||. ..:.....:|:|:||||.|||...|...|.....| |.::.:...:  
plant   178 SAHSIIGTPEFMAPEL-YEENYNELIDVYSFGMCFLEMITSEFPYSECNHPAQIYKKVVGGKLPG 241

  Fly   341 -FSLENDLQ-RDLIRKCLNPQPQDRPSANDLLFHPLLFEVHSLKLLTAHCLVFSPANRTMFSETA 403
             |....|:: :..|.||| .....|.||.:||..|.|....|..:.|                  
plant   242 AFYRVGDIEAQRFIGKCL-VSASKRVSAKELLQDPFLASDESWMVYT------------------ 287

  Fly   404 FDGLMQRYYQPDVVMAQLRLAGGQERQYRLADVSGADKLEKFVEDVKYGVYPLITYSGKKPPNFR 468
                                             |||...:.|:.:                    
plant   288 ---------------------------------SGAGNPKPFLNE-------------------- 299

  Fly   469 SRAASPERADSVKSATPEPVDTESRRIVNMMCSVKIKEDSNDITMTILLRMDDKMNRQLTCQVN- 532
                  ...|::|..     |.|.|  ..|..:.|:..:.|.|.:.:.:..|:.:...:....: 
plant   300 ------NEMDTLKLE-----DDELR--TEMSIAGKLGAEDNKIDLEVQIAYDNGLANNVFFPFDI 351

  Fly   533 ENDTAADLTSELVRLGFVHLDDQDKIQVLLEETLKAGVMSDGAGAESSGAGVTTTATMAALEQLE 597
            .|||:.|:..|:|:          :::::..|.::...|.||                 |:..|.
plant   352 MNDTSIDVAKEMVK----------ELEIIDWEPVEIAKMIDG-----------------AISSLV 389

  Fly   598 RNWSISSD----------------------ADKQGTAVMYVPQEQQN-ADGDVDVE-------HS 632
            .:|....|                      :..|.:...|:.:..|: ...|:..|       ||
plant   390 SDWKYEEDDETPHDHHRHRTDSFHSSSSHASSSQASLSNYMARGLQDWVQDDLHDETYSQSSSHS 454

  Fly   633 GTTSN 637
            |:.||
plant   455 GSYSN 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MadmNP_001303420.1 PK_NRBP1_like 114..376 CDD:270886 84/276 (30%)
S_TKc 123..375 CDD:214567 83/266 (31%)
WNK4NP_200643.1 STKc_WNK 17..277 CDD:270885 87/285 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D695382at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13902
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X143
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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