DRSC/TRiP Functional Genomics Resources

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Protein Alignment Madm and nrbp2

DIOPT Version :9

Sequence 1:NP_001303420.1 Gene:Madm / 40710 FlyBaseID:FBgn0027497 Length:637 Species:Drosophila melanogaster
Sequence 2:XP_031759312.1 Gene:nrbp2 / 779874 XenbaseID:XB-GENE-5826617 Length:468 Species:Xenopus tropicalis


Alignment Length:480 Identity:222/480 - (46%)
Similarity:316/480 - (65%) Gaps:39/480 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 SPCGRWLKRREEVDQRDVPGIDCVHLAMDTEEGVEVVWNEVQYASLQELKSQEEKMRQVFDNLLQ 164
            :||     .:.:|:|.::|||:..:|||||||||||||||:|::..:..|:.|||::.:|.||:.
 Frog     3 APC-----YQLQVNQGNMPGIESTYLAMDTEEGVEVVWNELQFSDKKIFKAHEEKIKNLFQNLMV 62

  Fly   165 LDHQNIVKFHRYWTDTQQAERPRVVFITEYMSSGSLKQFLKRTKRNAKRLPLESWRRWCTQILSA 229
            :||.|:||||:||.|.|:.. .|:||||||:|||||:||||:||:|.|.:...:|:|||||||||
 Frog    63 IDHPNVVKFHKYWPDVQETS-ARLVFITEYVSSGSLRQFLKKTKKNRKTMNSRAWKRWCTQILSA 126

  Fly   230 LSYLHSCSPPIIHGNLTCDSIFIQHNGLVKIGSV----------VPDAVHYSVRRGRERERERER 284
            |||||.|.|||||||||.|:||||||||:|||||          |||    .:|...:.:||..|
 Frog   127 LSYLHCCDPPIIHGNLTSDTIFIQHNGLIKIGSVWHRVFAHELPVPD----DLRTPLKIQREEHR 187

  Fly   285 GAHYFQAPEYGAADQLTAALDIYAFGMCALEMAALEIQPSNSESTAINEETIQRTIFSLENDLQR 349
            ..|:| .||:|..:..| |:|||:|||||||||.|||| ||.|.  ::|:.|.|.:.|||:...:
 Frog   188 TLHFF-PPEFGYLEDGT-AMDIYSFGMCALEMAVLEIQ-SNGEK--VSEDNIIRAVHSLEDLNMK 247

  Fly   350 DLIRKCLNPQPQDRPSANDLLFHPLLFEVHSLKLLTAHCLVFSP--ANRTMFSETA--FDGLMQR 410
            |.|.:||:..|:.||||::||||.:||||||||||.|||.:.:|  |..|:..|..  .|.|   
 Frog   248 DFIEQCLSVAPEKRPSAHNLLFHRVLFEVHSLKLLAAHCFLNTPYIAQDTLLEEKTKRIDAL--- 309

  Fly   411 YYQPDVVMAQLRLAGGQERQYRLADVSGADKLEKFVEDVKYGVYPLITYSGKKPPNF-RSRAASP 474
                 .|.|.:.........:|.:.||..: |:||:||::.|::||:.::..:|..| |....|.
 Frog   310 -----GVFASVPRKAHARIIWRYSQVSSME-LDKFLEDIRNGLFPLMNFTDCRPQIFPRGLPQSQ 368

  Fly   475 ERADSVKSATPEPVDTESRRIVNMMCSVKIKEDSNDITMTILLRMDDKMNRQLTCQVNENDTAAD 539
            |.....|:.||||::.|:|:|:.|.|:::.|||.....:|:.|:::|||:|.|:|.:..:::...
 Frog   369 EDLHVTKTPTPEPMEVETRKIIQMNCNLERKEDRARWHLTLYLKLEDKMHRHLSCDLLPDESCES 433

  Fly   540 LTSELVRLGFVHLDDQDKIQVLLEE 564
            |.||||:.||:..:|:.|:.:.|||
 Frog   434 LASELVQYGFISQEDRQKMALFLEE 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MadmNP_001303420.1 PK_NRBP1_like 114..376 CDD:270886 149/271 (55%)
S_TKc 123..375 CDD:214567 145/261 (56%)
nrbp2XP_031759312.1 PKc_like 12..274 CDD:419665 149/271 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D233882at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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