DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Madm and wnk1b

DIOPT Version :9

Sequence 1:NP_001303420.1 Gene:Madm / 40710 FlyBaseID:FBgn0027497 Length:637 Species:Drosophila melanogaster
Sequence 2:XP_009298358.1 Gene:wnk1b / 561159 ZFINID:ZDB-GENE-030131-2656 Length:2463 Species:Danio rerio


Alignment Length:375 Identity:110/375 - (29%)
Similarity:165/375 - (44%) Gaps:80/375 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 IVSASTADAGSSAAVGVGVV------------------------AGSEGVNLDSSPRESGDDSED 92
            :.|.|..||||..:..:|.|                        .|......::..||:....:|
Zfish   131 VQSPSVQDAGSRQSEVLGKVETELSDVGDKEQESRVTDKQEEEERGVAKARAEAELREAVKKEQD 195

  Fly    93 ESEILE-----ESPCGRWLKRREEVDQRDVPGIDCVHLAMDTEEGVEVVWNEVQYASLQELKSQE 152
            |.|.:|     .||.||:||...|:.:   .....|:..:|||..|||.|.|:|...|.  :|:.
Zfish   196 EIEEVETKAVGTSPDGRFLKFDIEIGR---GSFKTVYKGLDTETTVEVAWCELQDRKLS--RSER 255

  Fly   153 EKMRQVFDNLLQLDHQNIVKFHRYWTDTQQAERPRVVFITEYMSSGSLKQFLKRTKRNAKRLPLE 217
            ::.::....|..|.|.|||:|:..| ::....|..:|.:||.|:||:||.:|||    .|.:.::
Zfish   256 QRFKEEAGMLKGLQHPNIVRFYDSW-ESPSKGRKCIVLVTELMTSGTLKTYLKR----FKVMKIK 315

  Fly   218 SWRRWCTQILSALSYLHSCSPPIIHGNLTCDSIFIQ-HNGLVKIGSVVPDAVHYSVRRGRERERE 281
            ..|.||.|||..|.:||:.:|||||.:|.||:|||. ..|.||||.:....:.      |....:
Zfish   316 VLRSWCRQILKGLHFLHTRAPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK------RSSFAK 374

  Fly   282 RERGAHYFQAPEYGAADQLTAALDIYAFGMCALEMAALE-------------------IQPSNSE 327
            ...|...|.|||. ..::...::|:||||||.||||..|                   ::|.:.:
Zfish   375 SVIGTPEFMAPEM-YEEKYDESVDVYAFGMCMLEMATSEYPYSECQNPAQIYRRVTSGVKPGSFD 438

  Fly   328 STAINEETIQRTIFSLENDLQRDLIRKCLNPQPQDRPSANDLLFHPLLFE 377
            ..||.|              .:::|..|:.....:|.:..|||.|....|
Zfish   439 KVAIPE--------------VKEIIEGCIRQNKDERYAIKDLLNHAFFQE 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MadmNP_001303420.1 PK_NRBP1_like 114..376 CDD:270886 87/281 (31%)
S_TKc 123..375 CDD:214567 87/271 (32%)
wnk1bXP_009298358.1 STKc_WNK1 188..476 CDD:270932 100/318 (31%)
S_TKc 219..472 CDD:214567 88/283 (31%)
OSR1_C 493..530 CDD:289010
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574310
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X143
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.930

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