DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Madm and Wnk3

DIOPT Version :9

Sequence 1:NP_001303420.1 Gene:Madm / 40710 FlyBaseID:FBgn0027497 Length:637 Species:Drosophila melanogaster
Sequence 2:XP_006256844.1 Gene:Wnk3 / 317420 RGDID:1563131 Length:1745 Species:Rattus norvegicus


Alignment Length:642 Identity:155/642 - (24%)
Similarity:237/642 - (36%) Gaps:220/642 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 VGVGVVAGSEGVNLDSSPRESGDDSED------ESEILEE--------SPCGRWLKRREEVDQRD 116
            |...|:.|.:.|..:...:.:.:.|:|      |.|:.||        ||.||:||...|:.:  
  Rat    92 VPTNVLRGGQEVKYEQCSKATSESSKDCFKEKTEKEMEEEAEMKAVATSPSGRFLKFDIELGR-- 154

  Fly   117 VPGIDCVHLAMDTEEGVEVVWNEVQYASLQELKSQEEKMRQVFDNLLQLDHQNIVKFHRYWTDTQ 181
             .....|:..:|||..|||.|.|:|...|  .|:::::.::..:.|..|.|.|||:|:..|....
  Rat   155 -GAFKTVYKGLDTETWVEVAWCELQDRKL--TKAEQQRFKEEAEMLKGLQHPNIVRFYDSWESIL 216

  Fly   182 QAERPRVVFITEYMSSGSLKQFLKRTKRNAKRLPLESWRRWCTQILSALSYLHSCSPPIIHGNLT 246
            :.:: .:|.:||.|:||:||.:|||.|....::    .|.||.|||..|.:||:.:|||||.:|.
  Rat   217 KGKK-CIVLVTELMTSGTLKTYLKRFKVMKPKV----LRSWCRQILKGLQFLHTRTPPIIHRDLK 276

  Fly   247 CDSIFIQ-HNGLVKIG--------------SVVPDAVHYSVRRGRERERERERGAHYFQAPEYGA 296
            ||:|||. ..|.||||              ||:                    |...|.|||. .
  Rat   277 CDNIFITGPTGSVKIGDLGLATLMRTSFAKSVI--------------------GTPEFMAPEM-Y 320

  Fly   297 ADQLTAALDIYAFGMCALEMAALEIQPSNSESTAINEETIQRTI--------FSLENDLQ-RDLI 352
            .:....::|:||||||.||||..|...|..::.|    .|.|.:        |:...|.: :::|
  Rat   321 EEHYDESVDVYAFGMCMLEMATSEYPYSECQNAA----QIYRKVTSGIKPASFNKVTDPEVKEII 381

  Fly   353 RKCLNPQPQDRPSANDLLFHPLLFEVHSLKLLTAHCLVFSPANRTMFSETAFDGLMQRYYQPDVV 417
            ..|:.....:|.|..|||                        |...|:|..  ||.....:.|  
  Rat   382 EGCIRQNKSERLSIKDLL------------------------NHAFFAEDT--GLRVELAEED-- 418

  Fly   418 MAQLRLAGGQERQYRLADVSGAD-KLEKFVEDVKYGVYPLITYSGKKPPNFRSRAASPERADSVK 481
                             |.|.:. .|..:|||.|                               
  Rat   419 -----------------DCSNSSLALRLWVEDPK------------------------------- 435

  Fly   482 SATPEPVDTESRRIVNMMCSVKIKEDSNDITMTILLRMDDKMNRQLTCQVN-ENDTAADLTSELV 545
                                 |:|....|             |..:....| |.||..::..|:|
  Rat   436 ---------------------KLKGKHKD-------------NEAIEFSFNLEADTPEEVAYEMV 466

  Fly   546 RLGFVHLDD--------QDKIQVL--LEETLKAGVMSDGAGAESSGAGVTT----TATM------ 590
            :.||.|..|        :|::.::  :.|...||.:.:...::...|....    |||:      
  Rat   467 KSGFFHESDSKAVAKSIRDRVTLIKKIREKKPAGCLEERRDSQCKHARNVNPQQQTATLRPAPGP 531

  Fly   591 ---AALEQLERNWSISSDADKQGTAVMYVPQEQQNADGDVDVE-------HSGTTSN 637
               |..|:.|.:..:.... .||.|    .|:..:..||...|       ||.|:|:
  Rat   532 HNAAECEETEVDQHVRQQL-VQGKA----QQQPSSVRGDTSSEPAAGPVLHSDTSSH 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MadmNP_001303420.1 PK_NRBP1_like 114..376 CDD:270886 89/285 (31%)
S_TKc 123..375 CDD:214567 89/275 (32%)
Wnk3XP_006256844.1 STKc_WNK3 135..409 CDD:270933 99/334 (30%)
OSR1_C 425..488 CDD:403428 20/127 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335049
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X143
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.840

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