DRSC/TRiP Functional Genomics Resources

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Protein Alignment Madm and hpo-11

DIOPT Version :9

Sequence 1:NP_001303420.1 Gene:Madm / 40710 FlyBaseID:FBgn0027497 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_492022.3 Gene:hpo-11 / 186807 WormBaseID:WBGene00010427 Length:649 Species:Caenorhabditis elegans


Alignment Length:642 Identity:239/642 - (37%)
Similarity:342/642 - (53%) Gaps:142/642 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 VVAGSEGVNLDSSPRESGDDSEDES------EILEESPCGRWLKRREEVDQRDVPGIDCVHLAMD 128
            |.:|.|......:|  .|||:..:|      |||||||..||.||||:|.||||||||..:||||
 Worm     2 VSSGEERTAAGKTP--IGDDAASDSDADGAEEILEESPDKRWSKRREQVKQRDVPGIDVAYLAMD 64

  Fly   129 TEEGVEVVWNEVQYASLQELKSQEEKMRQVFDNLLQLDHQNIVKFHRYWTDTQQAERPRVVFITE 193
            .|.|.||||||||::..:..::||||:..|||||.||.|.|:||||:||||: ::|:||::||||
 Worm    65 NETGNEVVWNEVQFSERKNFRAQEEKINAVFDNLTQLVHTNLVKFHKYWTDS-KSEKPRIIFITE 128

  Fly   194 YMSSGSLKQFLKRTKRNAKRLPLESWRRWCTQILSALSYLHSCSPPIIHGNLTCDSIFIQHNGLV 258
            ||||||:..||:||::....|.:::|::|.|||||||:||||..||||||||||:::|||.|||:
 Worm   129 YMSSGSMSAFLQRTRKAGSSLSIKAWKKWTTQILSALNYLHSSDPPIIHGNLTCNTVFIQQNGLI 193

  Fly   259 KIGSVVPDAVHYSVRRGRERERERERGAHYFQAPEYGAAD--QLTAALDIYAFGMCALEMAAL-- 319
            |||.|.|||:::.|:..||..|.    .||. ||||...|  :||:|.|||:||:|:||:|.:  
 Worm   194 KIGCVAPDAINHHVKTCRENMRY----MHYI-APEYEILDNTELTSAADIYSFGICSLEIAVIGG 253

  Fly   320 --EIQPSNSESTAINEETIQRTIFSLENDLQRDLIRKCLNPQPQDRPSANDLLFHPLLFEVHSLK 382
              ..|..:||. .:.|:.|::.|.|||:.:|:|.||:||...|.:||||.:||||.:||||||||
 Worm   254 LSGCQNGSSEG-PVTEDVIEKAIRSLEDPMQQDFIRQCLRKDPAERPSARELLFHQILFEVHSLK 317

  Fly   383 LLTAHCLVFSPANRTMFSETAFDGLMQRYYQPDVVMAQLRLAGGQERQYRLADVSGADKLEKFVE 447
            ||:||.:|.|.....: ||:||     |....:.:.|..:|   :|..|........| ||||::
 Worm   318 LLSAHAIVDSKKYEDV-SESAF-----RIKDNETIAATSKL---REMAYCQVAAFQVD-LEKFLD 372

  Fly   448 DVKYGVYPLI--------------TYSGKKP---------------------------------- 464
            ||:.|:|||.              .||...|                                  
 Worm   373 DVRNGIYPLTAFAPLAHQPSTTLRAYSNTNPSTLITTDISAPSSTHPSANSTITAETSVNTSLPG 437

  Fly   465 --------------PNFRSRAASPERAD--------------------------------SVKSA 483
                          |:...::||||..|                                ...|.
 Worm   438 QSSQPSGTTTNTNGPSSIGKSASPEAVDKKIGEVTSTESTSKVEVEVNGANVTIGSSNGRDAGSP 502

  Fly   484 TPE---------PVDTESRRIVNMMCSVKIKEDSNDITMTILLRMDDKMNRQLTCQVNENDTAAD 539
            |||         .:..|:|.|:.:...::.:|      |:|:|.::|:|:||||..:|:.|....
 Worm   503 TPEEEGEPNGERDMRLENRHILEINVHIENEE------MSIVLLLEDQMHRQLTTSINKGDNPET 561

  Fly   540 LTSELVRLGFVHLDDQDKIQ--VLLEETLKAGVMSDGAGAESSGAGVTTTATMAALE 594
            ||..|:..||:...|.:.::  :.:...::|..:::|...|.:......:.:.|.:|
 Worm   562 LTENLITHGFMCQLDSEGVEKAIAVAFDIRAARIAEGVQEEENETSTRESNSEAPIE 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MadmNP_001303420.1 PK_NRBP1_like 114..376 CDD:270886 144/267 (54%)
S_TKc 123..375 CDD:214567 136/257 (53%)
hpo-11NP_492022.3 PKc_like 50..311 CDD:389743 144/267 (54%)
PHA03255 376..>490 CDD:165513 13/113 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159457
Domainoid 1 1.000 237 1.000 Domainoid score I1308
eggNOG 1 0.900 - - E1_KOG1266
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 404 1.000 Inparanoid score I1080
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D233882at33208
OrthoFinder 1 1.000 - - FOG0002915
OrthoInspector 1 1.000 - - oto17398
orthoMCL 1 0.900 - - OOG6_107807
Panther 1 1.100 - - LDO PTHR13902
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3170
SonicParanoid 1 1.000 - - X143
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.790

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