DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Madm and puf60

DIOPT Version :10

Sequence 1:NP_649581.1 Gene:Madm / 40710 FlyBaseID:FBgn0027497 Length:637 Species:Drosophila melanogaster
Sequence 2:XP_031759079.1 Gene:puf60 / 100145091 XenbaseID:XB-GENE-5785623 Length:529 Species:Xenopus tropicalis


Alignment Length:585 Identity:105/585 - (17%)
Similarity:189/585 - (32%) Gaps:177/585 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 TEEGVEVVWNEVQYASLQELKSQEEKMRQVFDNLLQLDHQNIVKFHRYWTDTQQAERPRVVFITE 193
            |.|..|.:....:||..|.:||             .|..|.|...|:..|:.|.|.      :| 
 Frog    30 TLEQQEALQKAKKYAMEQSIKS-------------VLVKQTIAHQHQQLTNLQMAA------VT- 74

  Fly   194 YMSSGS-LKQFLKRTKRNAKRLPLESWRRWCTQILSALSY-------LHSCSP--PIIHGNLTCD 248
             ||.|. |........:..:.|.:     .|...:.::.|       ..:.:|  ||...:::.|
 Frog    75 -MSFGDPLSPLQSMAAQRQRALAI-----MCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWD 133

  Fly   249 SIFIQHNGLVKIGSVVPDAVHYSVRR-------GRE-------------------RERERERGAH 287
            |:.::|.|...:...||:|...::.:       ||.                   .|..|.....
 Frog   134 SVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARSFNRI 198

  Fly   288 YFQAPEYGAADQLTAALDI----YAFGMCALEMAA-------------LEIQPSNSESTAINEET 335
            |..:.....:|:     ||    .|||.....|.|             :|.:...|...|::   
 Frog   199 YVASVHQDLSDE-----DIKSVFEAFGKIKSCMLARDPTTGKHKGYGFIEYEKGQSSQDAVS--- 255

  Fly   336 IQRTIFSLENDLQRDLIRKCLNPQPQDRPSANDLLFHPLLFEVHSLKLLTAHCLVFSPANRTMFS 400
             ...:|.|.....|  :.|.:.| |.           |||.......|..|..:..:.|...:.:
 Frog   256 -SMNLFDLGGQYLR--VGKAVTP-PM-----------PLLTPATPGGLPPAAAVAAAAATAKITA 305

  Fly   401 ETAFDG--LMQRYYQPDVVMAQLRLA---GGQERQYRLADVSGADKLEKFVEDVKYGVYP----- 455
            :.|..|  ::.....|.:|...|.||   |...:....|...|          |..||.|     
 Frog   306 QEAVAGAAVLGTLASPGLVTPALTLAQPLGALPQAVMAAQAPG----------VITGVTPVRPPL 360

  Fly   456 --------LITYSGKKPPNFRSRAASPERADS---VKSATPEPVDTESRRIVN-------MMCSV 502
                    |:......||.........|:.:.   .:|..||.:..:....::       :|..:
 Frog   361 PVTIPPVGLVNPLLSSPPTLAQLEVKKEKEEEEILPESERPEMLSEQEHMSISGSSARHMVMQKL 425

  Fly   503 KIKEDSNDITMTILLRMDDKMNRQLTCQVNENDTAADLTSELVRLGFVH--------LDDQDKIQ 559
            ..|::|   |:.:|..|.|.  |.:     ::|...::|.|..:.|.|:        ..:::..:
 Frog   426 MRKQES---TVMVLRNMVDP--RDI-----DDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAE 480

  Fly   560 VLLEETLKAGVMSDGAGAESSGAGVTTTATMAALEQLERNWSISSDADKQGTAVMYVPQEQQNAD 624
            ::::..::..:.|:               |..|::.|...|.    |.::..|.:|..:...|:|
 Frog   481 IIVKIFVEFSMSSE---------------TQKAIQALNGRWF----AGRKVVAEVYDQERFDNSD 526

  Fly   625  624
             Frog   527  526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MadmNP_649581.1 PK_NRBP1_like 114..376 CDD:270886 57/299 (19%)
puf60XP_031759079.1 half-pint 10..529 CDD:130706 105/585 (18%)

Return to query results.
Submit another query.