DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sym and AT1G27570

DIOPT Version :10

Sequence 1:NP_649580.1 Gene:Sym / 40709 FlyBaseID:FBgn0037371 Length:1165 Species:Drosophila melanogaster
Sequence 2:NP_174077.1 Gene:AT1G27570 / 839648 AraportID:AT1G27570 Length:649 Species:Arabidopsis thaliana


Alignment Length:750 Identity:143/750 - (19%)
Similarity:241/750 - (32%) Gaps:277/750 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 STKCELLAKVQETVLGSCAELAEEFLESVLSLAHDSNMEVRKQVVAFVEQVCKVKVELLPHVINV 107
            :.|...|.:|:|.:|.....|:.|....:..|.....:.||:.::..:|:   |.:.:|.|...:
plant    27 AVKLSSLKEVKEILLSLEPSLSAEIFPYLRELCLSPEVLVRRSLIEIIEE---VGLRMLEHSYVL 88

  Fly   108 VSMLLR---DNSAQVIKRVIQACGSIYKNGLQYLCSLMEPGDS-----------AEQAWNILSLI 158
            ||:|:.   ||...|.::.|       ..|..:..|::|..::           ....|.::.:.
plant    89 VSVLIHLVGDNDPTVAEKSI-------STGTTFFRSILEKMETQFHHRGKVDRWCVNLWTLMLMF 146

  Fly   159 KAQI----LDMIDNENDGIRTNAIKFLEGVVVL----QSFADEDSLKRDGD---FSLADVPDHCT 212
            |..:    ||:......|::..|:||:|..::|    .|..::.|...:|.   .:::.:.....
plant   147 KDAVFNIALDLEPGRVVGVKVLALKFMETFILLITPHASDPEKVSTSSEGSRQMINISSLAAGLP 211

  Fly   213 LFRREKLQEEGNNILDILLQF-HGTTHISS---VNLIAC--TSSLCTIAKMRPIFMGAVVEAFKQ 271
            :.....|..|.|..|..|..| ...|.|..   :.:|.|  :.||..:|:.||:....|:     
plant   212 MLNLTGLMSEVNQTLVRLGSFLQAPTLIQDALPIAVIDCSLSFSLAVVARKRPVHYDTVL----- 271

  Fly   272 LNANLPPTLTDSQVSSVRKSLKMQLQTLLKNRGAFEFASTIRGMLVDLGSSTNEIQKLIPKMDKQ 336
                           ||...||.....::::|              ||      :.:..|.||..
plant   272 ---------------SVLGFLKCTSSPIVESR--------------DL------LFRAFPAMDPA 301

  Fly   337 EMARRQKRILENAAQSLAKRARLACEQQDQQQREMELDTEELERQKQKSTRVNEKFLAEHFRNPE 401
            :::                         ||..||:    :||       .|||     ||..| |
plant   302 DIS-------------------------DQVVREV----DEL-------FRVN-----EHAAN-E 324

  Fly   402 TVVTLVLEFLPSLPTEVPQKFLQEYTPIREMSIQQQVTNISRFFGEQLSEKRLGPGAATFSREPP 466
            ...:.:||..|:| :.:|.: |:::       :||.:        ..|.|..:|.....:.|...
plant   325 NRSSQILEVFPTL-SSLPMQ-LRDH-------LQQMI--------HWLDEAIIGDMLPQYERRND 372

  Fly   467 MRVKKVQAIESTLTAMEVDEDAVQ-----KLSEEEFQRKEEATKKL--RETMERAKGEQ------ 518
            ||             ..:|.|..|     :.|:|:..|.|.....|  .|...|::.||      
plant   373 MR-------------QVLDRDRRQRCLFKRFSDEDRARNEAIAYLLDHPEDGHRSQSEQIYGFSR 424

  Fly   519 ------------------TVIEKMKERAKTLKLQEITKPLP----------------------RN 543
                              .:||.::.......|..:...||                      ||
plant   425 VRRAVWVRCRIKNQMKMGVLIEFLESSVTVQSLGTVYSELPDDVGAEEIHKIVVLDIRFGNIDRN 489

  Fly   544 LKEKFLTDAVRR---------------ILNSERQCIKGGV-------------SSKRRKLVTVIA 580
            | ...|..|..|               ..|.....|..|.             ||   :||..:|
plant   490 L-GNLLVQAEPRNGSAAHLVPIDHELSFFNDAHPYITCGACWIKWLEQIDKDFSS---QLVNYVA 550

  Fly   581 ATFPD-------------NVRY-----GIMEFILEDIKQ-----RIDLAFSWLFEE---YSLLQG 619
            |..||             |.||     ....|:.:.:.|     :|.|..|:.:||   |:|   
plant   551 ALDPDRDLEFLRHCGWEPNQRYIENFTVFATFLKKAVSQGLTALQIGLLASYKWEEDLDYNL--- 612

  Fly   620 FTRHTYVKTENRPDHAYNELLNKLIFGIGERCDHK 654
               |..|.:..|.|       |..:..:|.|.:.:
plant   613 ---HCIVASVQRED-------NNFVESVGTRIEQR 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SymNP_649580.1 PDS5 <1..>198 CDD:410996 36/176 (20%)
HEAT repeat 43..96 CDD:410996 11/52 (21%)
HEAT repeat 104..139 CDD:410996 8/37 (22%)
SYMPK_PTA1_N 116..326 CDD:463403 41/237 (17%)
HEAT repeat 154..187 CDD:410996 8/36 (22%)
DUF5401 <332..>574 CDD:375164 57/322 (18%)
Symplekin_C 887..1067 CDD:463523
AT1G27570NP_174077.1 SYMPK_PTA1_N 100..>274 CDD:463403 35/200 (18%)
Protein Kinases, catalytic domain 373..596 CDD:473864 41/239 (17%)
Blue background indicates that the domain is not in the aligned region.

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