DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sym and ESP4

DIOPT Version :10

Sequence 1:NP_649580.1 Gene:Sym / 40709 FlyBaseID:FBgn0037371 Length:1165 Species:Drosophila melanogaster
Sequence 2:NP_195760.1 Gene:ESP4 / 831597 AraportID:AT5G01400 Length:1467 Species:Arabidopsis thaliana


Alignment Length:285 Identity:52/285 - (18%)
Similarity:97/285 - (34%) Gaps:78/285 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 PKLKPPSF-YCE--HESRTGLTLHYRSKRRGFLHYVQGQIRNISQELFQTEVVIELLDIEHDL-- 171
            |..||..| |.:  .:...|..:..|.||.|         |..:.::.|..|::...:..|.:  
plant    85 PHAKPSDFEYLKLIGKGSFGKVVLTRGKRDG---------RYYAVKVLQKNVILNKKEQRHIMAE 140

  Fly   172 ------NLEH-VIMRLHFN---------NLDFNRQGTAYRNLN-----------------DSILE 203
                  |::| .::.||::         .|||...|..:.:|.                 .|.|.
plant   141 RNVLLKNVKHPFLVTLHYSFQTSDKLFFVLDFINGGELFFHLQRERYFAEPRALFYAAEIGSALG 205

  Fly   204 KVKITSDIFFDIFPFIIVFNRGMRIRNIGIGLLRVMAGIVGKKINQTF-----------LLMRPF 257
            .:.....|:.|:.|..|:.:....|.....||.:  .||.......||           ::.:|:
plant   206 YLHSIDIIYRDLKPENILLDSQGHIVLTDFGLCK--EGISNSDTTLTFCGTPEYLAPEVIVKQPY 268

  Fly   258 IR-FRWEEI------MLH---------SNNIFELISSDPIQEDEDGILVYKTTDVDQMTEERHRM 306
            .. ..|..:      |||         :..::|.|...|:....| |.:...:.::::.|:..::
plant   269 DNTVDWWCLGSVLYEMLHGLPPFYNRDTATMYENILHKPLTTRPD-ISLPAISILEELLEKDPKL 332

  Fly   307 GDGEREKFLSLKGQMFYME-EWESI 330
            ..|....|..:|...|:.. .|..:
plant   333 RLGVNNDFQDIKNHAFFASINWADL 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SymNP_649580.1 PDS5 <1..>198 CDD:410996 22/106 (21%)
HEAT repeat 43..96 CDD:410996
HEAT repeat 104..139 CDD:410996 9/29 (31%)
SYMPK_PTA1_N 116..326 CDD:463403 49/275 (18%)
HEAT repeat 154..187 CDD:410996 8/50 (16%)
DUF5401 <332..>574 CDD:375164
Symplekin_C 887..1067 CDD:463523
ESP4NP_195760.1 HEAT repeat 46..74 CDD:293787
HEAT 48..>104 CDD:441023 5/18 (28%)
HEAT repeat 83..106 CDD:293787 6/20 (30%)
SYMPK_PTA1_N 96..291 CDD:463403 36/205 (18%)
Symplekin_C 1033..1196 CDD:463523
ser_rich_anae_1 <1286..>1433 CDD:468206
Blue background indicates that the domain is not in the aligned region.

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