DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sym and pta1

DIOPT Version :9

Sequence 1:NP_649580.1 Gene:Sym / 40709 FlyBaseID:FBgn0037371 Length:1165 Species:Drosophila melanogaster
Sequence 2:NP_594351.2 Gene:pta1 / 2543538 PomBaseID:SPAC1071.01c Length:670 Species:Schizosaccharomyces pombe


Alignment Length:744 Identity:153/744 - (20%)
Similarity:281/744 - (37%) Gaps:207/744 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 LAEEFLESVLSLAHDSNMEVRKQVVAFV-----------EQVCKVKVELLPHVINVVSMLLRDNS 116
            |..|.:.::||:|:.|::..:|.:..|:           ||...:.|..|.   .:||:...||.
pombe    26 LFPEIVRNILSVANYSDIRYKKWMANFLWFGFSSKNVKFEQKLDLAVTCLD---TIVSLYAVDNE 87

  Fly   117 AQVIKRVIQACGSIYKNGLQYLCSLMEPGDSAEQAWNILSLIKAQILDMIDNENDGIRTNAIKFL 181
             :|.|.||....:||.  |.:|.....|.||:  .|:.|:.:|.:|::..|..|..:..:.|||:
pombe    88 -EVKKDVISCSCTIYP--LVFLHCCTSPNDSS--TWDTLTKLKNEIINDFDKGNKPLLISCIKFI 147

  Fly   182 EGVVVLQSFADED-SLKRDGDFSLADVPDHCTLFRREKLQEEGNNILDILLQFHGTTHISSVNLI 245
            ..|::.|.....| .|....|.||:.||.|........|:.|.|   |::.:........|:|::
pombe   148 SCVILTQVPGIRDPRLVTKSDVSLSKVPTHHPFINSNILRIEAN---DLIEKIFSILFSDSLNVL 209

  Fly   246 ACTSSLCTI-------AKMRPIFMGAVVEAFKQLNANLPPTLTDSQVSS--------VRKSLKMQ 295
            ..||.|..:       .::.|..:|:::|      .:||....:.::|:        :.|:||:.
pombe   210 YITSVLNILPVLVKRRKELAPKIIGSLLE------FHLPNPKDEIELSNESKLAIRCIEKNLKLI 268

  Fly   296 LQTLLKNRGAFEFASTIRGMLVDLGSSTNEIQKL---------IPKMDKQEMARRQ--------- 342
            |..|.|:.||                |::.::|:         ..|:| :.:.:||         
pombe   269 LLHLAKSTGA----------------SSSSVEKIHAYLSGQIYHTKVD-ESLKKRQYEGNISAAS 316

  Fly   343 KRILENAAQSLAKRARLACEQQDQQQREMELDTEELERQKQKSTRVNEKFLAEHFRNP------- 400
            ||:..:|.|||.:|.:......|..|                             .||       
pombe   317 KRVKSSAVQSLVERMQPQLSSHDGLQ-----------------------------NNPLISIFAS 352

  Fly   401 ETVVTLVLEF-LPSLPTEVPQKFLQEYTPIREMSIQQQVTNISRFFGEQLSEKRLGPGAATFSRE 464
            :|.:..:..| :.|:|.||..:.:  .|.:.::.        ..:|.:|::..|           
pombe   353 QTAINPLANFDVTSIPVEVATEIV--LTSLLKID--------KNYFHQQINMLR----------- 396

  Fly   465 PPMRVKKVQAIESTLTAMEVDEDAVQKLSEEEFQRKEEATKKLRETMER--AKGEQTVIEKMKER 527
              .||:.:...||.....:||||     .:|:::..|...:.:..::||  |:.|.:....:...
pombe   397 --ERVRSLSEPESLGLDQQVDED-----EDEDYEPPEVDVQTINASVEREAARLEGSAPSNVVTD 454

  Fly   528 AKTLKLQEITKPLPRNLKE----KFLTDAVRRILNSERQCIKGGVSSKRRKLVTV---------- 578
            |..|       |.|.:|..    ::...|:.|:.:...|..:..|||...:.:|:          
pombe   455 AFEL-------PTPDSLSPMAILEYFHGALSRLFDYAPQFERSIVSSSNLQNLTLENVDNTVWDK 512

  Fly   579 -----------------------------IAATFPDNVRYGIMEFILEDIKQRIDLAFSWLFEEY 614
                                         .:.|....||..:..::..:.:...:|..:||.||:
pombe   513 RHWAILLPRLCTRGLLNYQPVTSGEESGDASFTLSSFVRGQLFTYVASNWRSSTNLILNWLSEEW 577

  Fly   615 ----SLLQGFTRHTY--VKTENRPDHAYNELLNKLIFGIGERCDHKDKIILIRRVYLEAPILPEV 673
                .:|:....|.|  ||.|. |.  |.:...|:|..|....:.|||:.:|  ...|.|.|.:.
pombe   578 YNDRLMLENPDCHEYEDVKWEG-PQ--YEKWALKVIDSILPYLEAKDKVFMI--FMSELPELTDA 637

  Fly   674 SIGHLVQLSLDDEFSQHGLELIKDLAVLR 702
            .:..:..:.||.:.::.|....:.|.:.|
pombe   638 IVDKIKFVCLDPDKTKLGFMTFQYLIMFR 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SymNP_649580.1 DUF3453 115..345 CDD:288763 61/263 (23%)
Symplekin_C 887..1067 CDD:289095
pta1NP_594351.2 DUF3453 85..307 CDD:288763 59/252 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 51 1.000 Domainoid score I3361
eggNOG 1 0.900 - - E1_KOG1895
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003988
OrthoInspector 1 1.000 - - oto101322
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1026
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.840

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