DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1236 and ghrB

DIOPT Version :10

Sequence 1:NP_649579.2 Gene:CG1236 / 40708 FlyBaseID:FBgn0037370 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_418009.2 Gene:ghrB / 948074 ECOCYCID:EG12272 Length:324 Species:Escherichia coli


Alignment Length:326 Identity:120/326 - (36%)
Similarity:168/326 - (51%) Gaps:37/326 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VYVTRPDVDDSGLELLRKSCQVSTWH----------ETNPVPRSELIRVVAGKDALYCALTDKVD 83
            :|...||      :||::..:..|.|          |.|....:|...::...:.:..||.:|: 
E. coli     7 LYKALPD------DLLQRLQEHFTVHQVANLSPQTVEQNAAIFAEAEGLLGSNENVNAALLEKM- 64

  Fly    84 KEVLDAAGPQLKCVATISVGYDHIDVEECRKRGIRVGFTPDVLTDATAELTLALLLATNRRLFEA 148
                    |:|:..:|||||||:.||:....|.|.:..||.|||:..|:..:||:|:|.||:.|.
E. coli    65 --------PKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEV 121

  Fly   149 NKQVYNGGW-KSWAPMWMCGQGLKGSRVGLLGFGRIGQEIAARI-----VPFKPTEITYTTRSLR 207
            .::|..|.| .|..|.|. |..:....:|::|.||||..:|.|.     :|     |.|..|...
E. coli   122 AERVKAGEWTASIGPDWY-GTDVHHKTLGIVGMGRIGMALAQRAHFGFNMP-----ILYNARRHH 180

  Fly   208 PKEAAAVNARHVDFDEMLRESDLIVVCCALTPETKEIFNATAFQKMKPNCILINTARGGVVDQKA 272
            .:.....|||:.|.|.:|:|||.:.:...||.||..:|.|..|.|||.:.|.||..||.|||:.|
E. coli   181 KEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENA 245

  Fly   273 LYEALKTKRILAAGLDVTTPEPLPIDDPLLKLDNVVILPHIGSADIETRKEMSRITARNILAALA 337
            |..||:...|.||||||...|||.:|.|||.:.|||.:||||||..|||..|:.....|::.||.
E. coli   246 LIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAACAVDNLIDALQ 310

  Fly   338 G 338
            |
E. coli   311 G 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1236NP_649579.2 GDH 27..338 CDD:240626 119/324 (37%)
ghrBNP_418009.2 PRK15409 1..323 CDD:185307 120/326 (37%)

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